Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D09
         (903 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   5.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.6  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   10.0 

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +3

Query: 252 LVGLKFVWPSEELLQQHYSDLASRFFFPGLVKYMSSGPVVPMVWEGLNVVKT 407
           L+ LK VW       ++ S++  +F F     ++ +G     V   L+V+K+
Sbjct: 443 LIALKLVWIVALFKNENLSEMVKQFLFTQKFTFV-AGLATLSVLNLLSVIKS 493


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 672 FNHRMFNXNYENKTXYTXXNXF 607
           FN   FN NY+    Y+  N +
Sbjct: 206 FNDPQFNFNYQYNQAYSNYNNY 227


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 672 FNHRMFNXNYENKTXYTXXNXF 607
           FN   FN NY+    Y+  N +
Sbjct: 226 FNDPQFNFNYQYNQAYSNYNNY 247


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 392 KALPYHRDHRS*THVLY 342
           K +P H D R  THV+Y
Sbjct: 655 KFVPEHIDQRLCTHVVY 671


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 287 TSPATLQRFGIPVFL 331
           T P  +Q++ IPV L
Sbjct: 179 TKPTAIQKYAIPVIL 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,810
Number of Sequences: 336
Number of extensions: 3053
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)