Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D09
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   202   4e-52
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   189   2e-48
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   189   3e-48
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   188   7e-48
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531...    29   6.7  

>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  202 bits (492), Expect = 4e-52
 Identities = 90/147 (61%), Positives = 112/147 (76%)
 Frame = +3

Query: 162 ERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGL 341
           ERT I +KPDGVQRGL+  I+ RFE+KGFKLV +K V PS+E  Q+HY DL  R FF GL
Sbjct: 46  ERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPFFNGL 105

Query: 342 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 521
             ++SSGPV+ MVWEG  V+K GR+++GAT+P  S+PGTIRGDL + VGRNIIHGSD  E
Sbjct: 106 CDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPE 165

Query: 522 SAKKEIGLWFTDKEVVGWTPANENWVY 602
           +AK EIGLWF  +E+V +T   E W+Y
Sbjct: 166 TAKAEIGLWFEPRELVSYTSNEEKWIY 192


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  189 bits (461), Expect = 2e-48
 Identities = 85/147 (57%), Positives = 110/147 (74%)
 Frame = +3

Query: 162 ERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGL 341
           E++ IM+KPDGVQRGL+G II RFEKKGF L G+KF+       QQHY+DL+ + FFPGL
Sbjct: 2   EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61

Query: 342 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 521
           V+Y+ SGPVV MVWEG +VV TGR+++GAT P ++ PGTIR D  ++VGRN+IHGSDSV+
Sbjct: 62  VEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVD 121

Query: 522 SAKKEIGLWFTDKEVVGWTPANENWVY 602
           + KKEI LWF +  +  W      W+Y
Sbjct: 122 NGKKEIALWFPE-GLAEWRSNLHPWIY 147


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  189 bits (460), Expect = 3e-48
 Identities = 83/147 (56%), Positives = 110/147 (74%)
 Frame = +3

Query: 162 ERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGL 341
           E+T IM+KPDGVQRGL+G +I RFEKKGF L  +K +   +   ++HY+DL+S+ FF GL
Sbjct: 4   EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGL 63

Query: 342 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 521
           V+Y+ SGPVV MVWEG  VV TGR+++GATNP  ++PGTIRGD  + +GRN+IHGSDSVE
Sbjct: 64  VEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVE 123

Query: 522 SAKKEIGLWFTDKEVVGWTPANENWVY 602
           +A+KEI LWF +  +  W      W+Y
Sbjct: 124 NARKEIALWFPE-GIAEWRSNQHPWIY 149


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  188 bits (457), Expect = 7e-48
 Identities = 82/146 (56%), Positives = 108/146 (73%)
 Frame = +3

Query: 162 ERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGL 341
           E++ IM+KPDGVQRGLVG II RFEKKGF L GLK     ++L Q+HY DL  + FFPGL
Sbjct: 3   EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGL 62

Query: 342 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 521
           ++Y++SGPVV M WEG  VV + R+++GATNP  ++PGTIRGDL +Q GRN++HGSDS +
Sbjct: 63  IEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPD 122

Query: 522 SAKKEIGLWFTDKEVVGWTPANENWV 599
           + K+EI LWF + E+  W      W+
Sbjct: 123 NGKREIALWFKEGELCEWESVLTPWL 148


>06_03_0999 -
           26752410-26752523,26752601-26752830,26752914-26753169,
           26753763-26753828,26753921-26754046,26754148-26754288,
           26754377-26754387,26754523-26754670,26755326-26755454,
           26755573-26755710,26755808-26755876,26755955-26756023,
           26756565-26756720,26756885-26756985,26757068-26757215,
           26757540-26757702,26757833-26757965,26758049-26758226,
           26758330-26758572,26758664-26758732,26759063-26759187,
           26759727-26759766,26760756-26760812,26762831-26762935
          Length = 1004

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = +3

Query: 150 QEXRERTXIMVKPDGVQRGLV-GTIIERFEKKGFKLVGLKFVWPSEELLQQHYSD--LAS 320
           QE  ER   ++KP+   R L  G+  ++F    +KL+G+K  +PS+++ +   SD  L S
Sbjct: 630 QELAERQLDVIKPNLQSRMLKEGSEYDQF----WKLLGVKSEYPSQKIAKDQESDPHLFS 685

Query: 321 RFFFPGLVK 347
             F  G++K
Sbjct: 686 CTFSKGVLK 694


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,154,042
Number of Sequences: 37544
Number of extensions: 313712
Number of successful extensions: 719
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)