Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D09
         (903 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   194   7e-50
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    64   1e-10
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    48   7e-06

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  194 bits (473), Expect = 7e-50
 Identities = 91/148 (61%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
 Frame = +3

Query: 162 ERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGL 341
           ERT I +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  + FFP L
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 342 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 521
           ++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+
Sbjct: 65  IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVD 124

Query: 522 SAKKEIGLWFTDKEVVGW-TPANENWVY 602
           SA +EI  WF  +E+  + +P   +WVY
Sbjct: 125 SANREIAHWFKQEEINDYASPFINSWVY 152


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 36/77 (46%), Positives = 46/77 (59%)
 Frame = +3

Query: 327 FFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHG 506
           FFP L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      H 
Sbjct: 35  FFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGCHC 93

Query: 507 SDSVESAKKEIGLWFTD 557
           SDSV SA +E  LWF +
Sbjct: 94  SDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
 Frame = +3

Query: 174 IMVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGLVKY 350
           +++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    +FF+  LV++
Sbjct: 14  VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFYDRLVRH 73

Query: 351 MSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAK 530
           +SSGPV+ M   G      G   L        QP  IR    +   RN+ H SD  ++A+
Sbjct: 74  ISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASDE-DAAE 130

Query: 531 KEIGLW 548
           KE+ L+
Sbjct: 131 KELQLF 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,867,680
Number of Sequences: 27780
Number of extensions: 274229
Number of successful extensions: 683
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)