Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_D09
(903 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3, mitoch... 199 2e-51
At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1) ... 198 3e-51
At5g63310.1 68418.m07945 nucleotide diphosphate kinase II, chlor... 198 5e-51
At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4) ... 196 2e-50
At1g17410.1 68414.m02126 nucleoside diphosphate kinase family pr... 87 2e-17
At3g47450.2 68416.m05160 expressed protein 31 1.0
At3g47450.1 68416.m05159 expressed protein 31 1.0
At3g59410.1 68416.m06626 protein kinase family protein low simil... 29 5.6
At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family pr... 29 5.6
At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family pr... 29 5.6
At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)... 28 7.4
At4g22980.1 68417.m03316 expressed protein ; expression supporte... 28 7.4
>At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3,
mitochondrial (NDK3) identical to Nucleoside diphosphate
kinase III, mitochondrial precursor (NDK III) (NDP
kinase III) (NDPK III) (SP:O49203) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain;
Length = 238
Score = 199 bits (486), Expect = 2e-51
Identities = 88/147 (59%), Positives = 113/147 (76%)
Frame = +3
Query: 162 ERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGL 341
ERT I +KPDGVQRGL+ II RFE+KGFKLVG+K + PS++ Q+HY DL R FF GL
Sbjct: 89 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNGL 148
Query: 342 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 521
++SSGPV+ MVWEG V++ GR+++GAT+P S+PGTIRGDL + VGRNIIHGSD E
Sbjct: 149 CDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGPE 208
Query: 522 SAKKEIGLWFTDKEVVGWTPANENWVY 602
+AK EI LWF +E+V +T +E W+Y
Sbjct: 209 TAKDEISLWFKPQELVSYTSNSEKWLY 235
>At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1)
identical to identical to Nucleoside diphosphate kinase
I (NDK I) (NDP kinase I) (NDPK I) (SP:P39207)
[Arabidopsis thaliana]; contains Pfam PF00334 :
Nucleoside diphosphate kinase domain;
Length = 169
Score = 198 bits (484), Expect = 3e-51
Identities = 91/147 (61%), Positives = 110/147 (74%)
Frame = +3
Query: 162 ERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGL 341
E+T IM+KPDGVQRGL+G +I RFEKKGF L GLK + ++HY DL+S+ FF GL
Sbjct: 22 EQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGL 81
Query: 342 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 521
V Y+ SGPVV M+WEG NVV TGR+++GATNP S+PGTIRGD I +GRN+IHGSDSVE
Sbjct: 82 VDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVE 141
Query: 522 SAKKEIGLWFTDKEVVGWTPANENWVY 602
SA+KEI LWF D V W + WVY
Sbjct: 142 SARKEIALWFPDGP-VNWQSSVHPWVY 167
>At5g63310.1 68418.m07945 nucleotide diphosphate kinase II,
chloroplast (NDPK2) identical to SP|O64903 Nucleoside
diphosphate kinase II, chloroplast precursor (NDK II)
(NDP kinase II) (NDPK II) (NDPK Ia) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain; contains Pfam profile
PF00334: Nucleoside diphosphate kinase
Length = 231
Score = 198 bits (482), Expect = 5e-51
Identities = 86/149 (57%), Positives = 113/149 (75%)
Frame = +3
Query: 153 EXRERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFF 332
E E T IMVKPDG+QRGLVG II RFEKKGFKL+GLK +EL ++HY DL+++ FF
Sbjct: 81 EDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFF 140
Query: 333 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSD 512
P L++Y++SGPVV M WEG+ VV + R+++G T+P ++PGTIRGDL +Q GRNI+HGSD
Sbjct: 141 PNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSD 200
Query: 513 SVESAKKEIGLWFTDKEVVGWTPANENWV 599
S E+ K+EIGLWF + E+ W A W+
Sbjct: 201 SPENGKREIGLWFKEGELCKWDSALATWL 229
>At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4)
contains Pfam PF00334 : Nucleoside diphosphate kinase
domain; identical to nucleoside diphosphate kinase 4
(GI:11990430) [Arabidopsis thaliana]
Length = 237
Score = 196 bits (477), Expect = 2e-50
Identities = 88/147 (59%), Positives = 111/147 (75%)
Frame = +3
Query: 162 ERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGL 341
ERT I +KPDGVQRGL+ II RFE+KG+KLVG+K + PS+ Q+HY DL R FF GL
Sbjct: 88 ERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNGL 147
Query: 342 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 521
++SSGPVV MVWEG V++ GR+++GAT+P S+PGTIRGDL + VGRNIIHGSD E
Sbjct: 148 CNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPE 207
Query: 522 SAKKEIGLWFTDKEVVGWTPANENWVY 602
+AK EI LWF +E+V +T E W+Y
Sbjct: 208 TAKDEISLWFKPEELVSYTSNAEKWIY 234
>At1g17410.1 68414.m02126 nucleoside diphosphate kinase family
protein contains Pfam PF00334 : Nucleoside diphosphate
kinase domain; similar to Nucleoside diphosphate kinase
homolog 5 (NDK-H 5) (NDP kinase homolog 5) (nm23-H5)
(Testis-specific nm23 homolog) (Inhibitor of p53-induced
apoptosis-beta) (IPIA-beta) (SP:P56597) {Homo sapiens}
Length = 181
Score = 87.0 bits (206), Expect = 2e-17
Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Frame = +3
Query: 162 ERTXIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRFFFPGL 341
ERT M+KPDGV I + GF +V +E Y + +SR FFP L
Sbjct: 33 ERTLAMIKPDGVSGNYTEEIKTIVVEAGFNIVKEMLTQLDKETASAFYEEHSSRSFFPHL 92
Query: 342 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXD---SQPGTIRGDLCIQVGRNIIHGSD 512
V YM+SGPV+ MV E N V R ++G T+ S P +IR +N +HGSD
Sbjct: 93 VTYMTSGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKISHPHSIRALCGKNSQKNCVHGSD 152
Query: 513 SVESAKKEIGLWFTD 557
S SA++EI +F D
Sbjct: 153 STSSAEREIKFFFKD 167
>At3g47450.2 68416.m05160 expressed protein
Length = 561
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -3
Query: 547 QRPISFLADSTLSEPWMMLRPT*MQRS--PRIVPGCESXGLVAPSI*RPVFTTLRPSHTI 374
+RP S +A S L W+ + P R PR + E + S+ +PV LRP+ I
Sbjct: 478 KRPASDVAISGLG--WISIEPIRKTRGTEPRDLNEAEHEIHICVSVPKPVEVFLRPTLPI 535
Query: 373 GTTGPELMYFTRPGKKNRDAK 311
GT+G E + K + +
Sbjct: 536 GTSGTEWYQYRELTDKEEEVR 556
>At3g47450.1 68416.m05159 expressed protein
Length = 561
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -3
Query: 547 QRPISFLADSTLSEPWMMLRPT*MQRS--PRIVPGCESXGLVAPSI*RPVFTTLRPSHTI 374
+RP S +A S L W+ + P R PR + E + S+ +PV LRP+ I
Sbjct: 478 KRPASDVAISGLG--WISIEPIRKTRGTEPRDLNEAEHEIHICVSVPKPVEVFLRPTLPI 535
Query: 373 GTTGPELMYFTRPGKKNRDAK 311
GT+G E + K + +
Sbjct: 536 GTSGTEWYQYRELTDKEEEVR 556
>At3g59410.1 68416.m06626 protein kinase family protein low
similarity to GCN2 eIF2alpha kinase [Mus musculus]
GI:6066585; contains Pfam profiles PF03129: Anticodon
binding domain, PF00069: Protein kinase domain
Length = 1241
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 45 GYEDTXISXDFILKSLPGCSARC 113
GYEDT IS I++ LPG +C
Sbjct: 74 GYEDTDISAMLIVRCLPGYPYKC 96
>At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 442
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 592 FSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 485
F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 146 FTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 553
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 592 FSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 485
F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 146 FTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 386
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 518 NAVRTMDDVTPNLNAEITADSAGLRV 441
NA+R DDV+P +N A +GLRV
Sbjct: 79 NALRQADDVSPEINTTKLAFVSGLRV 104
>At4g22980.1 68417.m03316 expressed protein ; expression supported
by MPSS
Length = 559
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 210 VGTIIERFEKKGFKLVGLKFVWPSEELLQQ 299
V +I EKKG K +F WPS E+L +
Sbjct: 205 VEEMIRISEKKGIKPQSAEFSWPSTEILSE 234
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,039,616
Number of Sequences: 28952
Number of extensions: 254386
Number of successful extensions: 561
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2129873112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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