Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_D08
(863 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 76 2e-15
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 76 2e-15
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 76 2e-15
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 76 2e-15
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 41 4e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 0.54
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 25 3.0
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 75.8 bits (178), Expect = 2e-15
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +2
Query: 473 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 652
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 653 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 751
+++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTD 93
Score = 36.3 bits (80), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN L+ +S
Sbjct: 98 IDNEALYDICFRTLKVPNPSYGDLNHLVSLTMS 130
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 75.8 bits (178), Expect = 2e-15
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +2
Query: 473 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 652
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 653 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 751
+++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTD 93
Score = 36.3 bits (80), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN L+ +S
Sbjct: 98 IDNEALYDICFRTLKVPNPSYGDLNHLVSLTMS 130
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 75.8 bits (178), Expect = 2e-15
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +2
Query: 473 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 652
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 653 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 751
+++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTD 93
Score = 36.3 bits (80), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN L+ +S
Sbjct: 98 IDNEALYDICFRTLKVPNPSYGDLNHLVSLTMS 130
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 75.8 bits (178), Expect = 2e-15
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +2
Query: 473 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 652
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 653 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 751
+++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTD 93
Score = 36.3 bits (80), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN L+ +S
Sbjct: 98 IDNEALYDICFRTLKVPNPSYGDLNHLVSLTMS 130
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 41.1 bits (92), Expect = 4e-05
Identities = 26/68 (38%), Positives = 28/68 (41%)
Frame = +3
Query: 210 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 389
P T WS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 390 XXAHTDSC 413
A T SC
Sbjct: 79 APARTASC 86
Score = 33.9 bits (74), Expect = 0.006
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 176 HVGQAGVQXGNACWE 220
HVGQAGVQ GN CW+
Sbjct: 8 HVGQAGVQIGNPCWD 22
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect(2) = 0.54
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 261 CPQTRPSGVETILSTLSSARPELAS 335
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Score = 21.8 bits (44), Expect(2) = 0.54
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 204 VMPAGSFTAWSTASSLMARCPQTRPSGV 287
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 80 SPVALXAAXFSFXSXFKHXXKLKSKCVRAS 169
+P A+ F S FKH + SKC ++
Sbjct: 912 APAAVVGLQFLHESLFKHFINITSKCTAST 941
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,878
Number of Sequences: 2352
Number of extensions: 16796
Number of successful extensions: 48
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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