Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_D08
(863 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 352 2e-97
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 352 2e-97
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 351 5e-97
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 351 5e-97
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 339 2e-93
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 339 2e-93
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 324 5e-89
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 172 2e-43
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 170 9e-43
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 169 2e-42
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 169 2e-42
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 168 5e-42
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 167 6e-42
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 166 1e-41
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 166 1e-41
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 162 3e-40
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 122 3e-28
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 122 4e-28
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 1.3
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 2.3
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 28 7.0
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 28 7.0
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 28 7.0
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 28 7.0
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 28 9.2
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 28 9.2
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 28 9.2
At1g66690.1 68414.m07580 S-adenosyl-L-methionine:carboxyl methyl... 28 9.2
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 352 bits (865), Expect = 2e-97
Identities = 156/196 (79%), Positives = 176/196 (89%)
Frame = +2
Query: 176 HVGQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 355
H+GQAG+Q GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVF 67
Query: 356 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 535
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 536 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 715
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
Query: 716 ILTTHTTLEHSDCAFM 763
+L+TH+ LEH+D + +
Sbjct: 188 VLSTHSLLEHTDVSIL 203
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE IYDICRR+L IERPT TNLNRL+ ++S
Sbjct: 204 LDNEAIYDICRRSLSIERPTYTNLNRLVSQVIS 236
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 352 bits (865), Expect = 2e-97
Identities = 156/196 (79%), Positives = 176/196 (89%)
Frame = +2
Query: 176 HVGQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 355
H+GQAG+Q GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVF 67
Query: 356 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 535
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 536 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 715
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
Query: 716 ILTTHTTLEHSDCAFM 763
+L+TH+ LEH+D + +
Sbjct: 188 VLSTHSLLEHTDVSIL 203
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE IYDICRR+L IERPT TNLNRL+ ++S
Sbjct: 204 LDNEAIYDICRRSLSIERPTYTNLNRLVSQVIS 236
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 351 bits (862), Expect = 5e-97
Identities = 156/196 (79%), Positives = 175/196 (89%)
Frame = +2
Query: 176 HVGQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 355
H+GQAG+Q GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVF 67
Query: 356 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 535
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 536 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 715
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
Query: 716 ILTTHTTLEHSDCAFM 763
+L+TH+ LEH+D + +
Sbjct: 188 VLSTHSLLEHTDVSIL 203
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE IYDICRR+L+IERPT TNLNRL+ ++S
Sbjct: 204 LDNEAIYDICRRSLNIERPTYTNLNRLVSQVIS 236
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 351 bits (862), Expect = 5e-97
Identities = 156/196 (79%), Positives = 175/196 (89%)
Frame = +2
Query: 176 HVGQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 355
H+GQAG+Q GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVF 67
Query: 356 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 535
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 536 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 715
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
Query: 716 ILTTHTTLEHSDCAFM 763
+L+TH+ LEH+D + +
Sbjct: 188 VLSTHSLLEHTDVSIL 203
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE IYDICRR+L+IERPT TNLNRL+ ++S
Sbjct: 204 LDNEAIYDICRRSLNIERPTYTNLNRLVSQVIS 236
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 339 bits (833), Expect = 2e-93
Identities = 151/196 (77%), Positives = 171/196 (87%)
Frame = +2
Query: 176 HVGQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 355
H+GQAG+Q GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVF 67
Query: 356 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 535
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 536 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 715
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNS 187
Query: 716 ILTTHTTLEHSDCAFM 763
+L+TH+ LEH+D A +
Sbjct: 188 VLSTHSLLEHTDVAVL 203
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE IYDICRR+LDIERPT TNLNRLI I+S
Sbjct: 204 LDNEAIYDICRRSLDIERPTYTNLNRLISQIIS 236
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 339 bits (833), Expect = 2e-93
Identities = 151/196 (77%), Positives = 171/196 (87%)
Frame = +2
Query: 176 HVGQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 355
H+GQAG+Q GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVF 67
Query: 356 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 535
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 536 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 715
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNS 187
Query: 716 ILTTHTTLEHSDCAFM 763
+L+TH+ LEH+D A +
Sbjct: 188 VLSTHSLLEHTDVAVL 203
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE IYDICRR+LDIERPT TNLNRLI I+S
Sbjct: 204 LDNEAIYDICRRSLDIERPTYTNLNRLISQIIS 236
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 324 bits (796), Expect = 5e-89
Identities = 142/192 (73%), Positives = 167/192 (86%)
Frame = +2
Query: 176 HVGQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 355
H+GQAG+Q GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+HVPRAVF
Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVF 67
Query: 356 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 535
+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD
Sbjct: 68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLAD 127
Query: 536 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 715
CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNS 187
Query: 716 ILTTHTTLEHSD 751
+L+TH+ LEH+D
Sbjct: 188 VLSTHSLLEHTD 199
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE IYDICRR+LDIERPT +NLNRLI +S
Sbjct: 204 LDNEAIYDICRRSLDIERPTYSNLNRLISQTIS 236
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 172 bits (419), Expect = 2e-43
Identities = 79/193 (40%), Positives = 118/193 (61%), Gaps = 3/193 (1%)
Frame = +2
Query: 182 GQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKHVPRAV 352
GQ G Q G+ WE+ C EHGI P G+ +G D + N +++E G++VPRA+
Sbjct: 10 GQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEASCGRYVPRAI 64
Query: 353 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 532
+DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 533 DQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 712
+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
Query: 713 SILTTHTTLEHSD 751
+ L+ H +E++D
Sbjct: 185 ATLSVHQLVENAD 197
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN LI +S
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 170 bits (414), Expect = 9e-43
Identities = 76/190 (40%), Positives = 116/190 (61%)
Frame = +2
Query: 182 GQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 361
GQ G Q G+ WE+ C EHG+ P G+ D + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGRYVPRAVLMD 68
Query: 362 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 541
LEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 542 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 721
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 129 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 188
Query: 722 TTHTTLEHSD 751
+ H +E++D
Sbjct: 189 SVHQLVENAD 198
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN LI +S
Sbjct: 203 LDNEALYDICFRTLKLSTPSFGDLNHLISATMS 235
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 77/190 (40%), Positives = 114/190 (60%)
Frame = +2
Query: 182 GQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 361
GQ G Q G WE+ C EHGI P G+ D + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMD 67
Query: 362 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 541
LEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 542 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 721
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Query: 722 TTHTTLEHSD 751
+ H +E++D
Sbjct: 188 SVHQLVENAD 197
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN LI +S
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 77/190 (40%), Positives = 114/190 (60%)
Frame = +2
Query: 182 GQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 361
GQ G Q G WE+ C EHGI P G+ D + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMD 67
Query: 362 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 541
LEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 542 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 721
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Query: 722 TTHTTLEHSD 751
+ H +E++D
Sbjct: 188 SVHQLVENAD 197
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN LI +S
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 168 bits (408), Expect = 5e-42
Identities = 76/190 (40%), Positives = 116/190 (61%)
Frame = +2
Query: 182 GQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 361
GQ G Q G+ WE+ C EHGI G+ D T + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVPRAVLMD 68
Query: 362 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 541
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 542 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 721
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 129 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 188
Query: 722 TTHTTLEHSD 751
+ H +E++D
Sbjct: 189 SVHQLVENAD 198
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN LI +S
Sbjct: 203 LDNEALYDICFRTLKLSTPSFGDLNHLISATMS 235
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 167 bits (407), Expect = 6e-42
Identities = 77/190 (40%), Positives = 115/190 (60%)
Frame = +2
Query: 182 GQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 361
GQ G Q G WE+ C EHGI GQ D + + N +F+E GK+VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGKYVPRAVLMD 67
Query: 362 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 541
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 542 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 721
LQGF + H LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATL 187
Query: 722 TTHTTLEHSD 751
+ H +E++D
Sbjct: 188 SVHQLVENAD 197
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + PT +LN LI +S
Sbjct: 202 LDNEALYDICFRTLKLANPTFGDLNHLISATMS 234
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 166 bits (404), Expect = 1e-41
Identities = 76/190 (40%), Positives = 114/190 (60%)
Frame = +2
Query: 182 GQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 361
GQ G Q G WE+ C EHGI G+ + + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGRFVPRAVLMD 67
Query: 362 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 541
LEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 542 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 721
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Query: 722 TTHTTLEHSD 751
+ H +E++D
Sbjct: 188 SVHQLVENAD 197
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN LI +S
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 166 bits (404), Expect = 1e-41
Identities = 76/190 (40%), Positives = 116/190 (61%)
Frame = +2
Query: 182 GQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 361
GQ G Q G+ WE+ LEHGI G+ D + + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGRYVPRAVLMD 67
Query: 362 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 541
LEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 542 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 721
LQGF + H LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATL 187
Query: 722 TTHTTLEHSD 751
+ H +E++D
Sbjct: 188 SVHQLVENAD 197
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + P+ +LN LI +S
Sbjct: 202 LDNEALYDICFRTLKLSTPSFGDLNHLISATMS 234
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 162 bits (393), Expect = 3e-40
Identities = 75/190 (39%), Positives = 114/190 (60%)
Frame = +2
Query: 182 GQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 361
GQ G Q G WE+ C EHGI GQ D + + + +F+E GK+VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGKYVPRAVLMD 67
Query: 362 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 541
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENS 127
Query: 542 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 721
LQGF + H LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATL 187
Query: 722 TTHTTLEHSD 751
+ H +E++D
Sbjct: 188 SVHQLVENAD 197
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 765 VDNEXIYDICRRNLDIERPTXTNLNRLIGXIVS 863
+DNE +YDIC R L + PT +LN LI +S
Sbjct: 202 LDNEALYDICFRTLKLANPTFGDLNHLISATMS 234
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 122 bits (294), Expect = 3e-28
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 3/195 (1%)
Frame = +2
Query: 179 VGQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 358
VGQ G Q G W+ CLEHGI DG + T GG D + FF + ++PRA+ +
Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLI 67
Query: 359 DLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLA 532
DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + A
Sbjct: 68 DLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREA 126
Query: 533 DQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPY 709
D L+GF++ H L+E L+ Y KK ++++P + S VV+PY
Sbjct: 127 DGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPY 186
Query: 710 NSILTTHTTLEHSDC 754
NS+LT ++DC
Sbjct: 187 NSLLTLKRLTLNADC 201
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 122 bits (293), Expect = 4e-28
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 3/195 (1%)
Frame = +2
Query: 179 VGQAGVQXGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 358
VGQ G Q G W+ CLEHGI DG + T GG D + FF + ++PRA+ +
Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLI 67
Query: 359 DLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLA 532
DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + A
Sbjct: 68 DLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREA 126
Query: 533 DQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPY 709
D L+GF++ H L+E L+ Y KK ++++P + S VV+PY
Sbjct: 127 DGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPY 186
Query: 710 NSILTTHTTLEHSDC 754
NS+LT ++DC
Sbjct: 187 NSLLTLKRLTLNADC 201
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -2
Query: 592 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 413
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 412 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 278
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 233 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 382
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 361 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITXLDSG 188
I E S G +A+ V R V T +G + +DA++QA KLP I + G
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVG 293
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 361 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITXLDSG 188
I E S G +A+ V R V T +G + +DA++QA KLP I + G
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVG 293
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 361 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITXLDSG 188
I E S G +A+ V R V T +G + +DA++QA KLP I + G
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVG 293
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 361 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITXLDSG 188
I E S G +A+ V R V T +G + +DA++QA KLP I + G
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVG 293
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 9.2
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 221 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 388
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 389 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 517
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 9.2
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 221 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 388
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 389 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 517
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 9.2
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 221 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 388
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 389 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 517
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At1g66690.1 68414.m07580 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
defense-related protein cjs1 [Brassica
carinata][GI:14009292][Mol Plant Pathol (2001)
2(3):159-169]
Length = 353
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 262 HLAIRLDAVLQAVKLPAGITXLDSGLANVXQRCT 161
H+A+ A L K+P GI DS L N +CT
Sbjct: 140 HIAVMSYAFLFTSKIPKGIMDRDSPLWNKDMQCT 173
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,375,605
Number of Sequences: 28952
Number of extensions: 358514
Number of successful extensions: 1030
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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