Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D07
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1169 + 24858843-24858993,24859495-24859788,24860303-248603...    31   1.6  
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216     29   6.3  

>08_02_1169 +
           24858843-24858993,24859495-24859788,24860303-24860349,
           24860779-24861277,24862233-24862274,24862376-24862666,
           24862793-24862932,24863278-24863770,24864105-24864484
          Length = 778

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +1

Query: 310 SGIATAYDRSKHVVYLGGED--GIYTFDYTTKSAKNFACHKLQHL 438
           + I+ AY   K    + GE+  G +  DYT  S ++  CH +Q L
Sbjct: 111 TSISQAYRAGKKAYLVNGEEKKGWFPIDYTMSSLQSVICHTVQKL 155


>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
          Length = 1030

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 364 EDGIYTFDYTTKSAKNFACHKLQHLANVPLSR 459
           + G  ++DY ++ AK F   ++ H ++VP SR
Sbjct: 691 DPGFCSWDYYSREAKAFHIEEISHASSVPSSR 722


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,731,692
Number of Sequences: 37544
Number of extensions: 349252
Number of successful extensions: 785
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)