Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_D06
(875 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 203 4e-51
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 173 6e-42
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 140 6e-32
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 136 9e-31
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 135 1e-30
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 130 5e-29
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 128 2e-28
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 120 6e-26
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 111 3e-23
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 99 2e-19
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 89 1e-16
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 88 3e-16
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 88 3e-16
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 85 2e-15
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 84 5e-15
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 82 2e-14
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 81 3e-14
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 81 5e-14
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 80 6e-14
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 73 7e-12
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 68 3e-10
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 66 8e-10
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 60 5e-08
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 59 1e-07
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 56 1e-06
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 56 2e-06
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 52 1e-05
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 52 3e-05
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 50 8e-05
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.021
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 41 0.047
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 38 0.44
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 0.77
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 1.0
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 34 4.1
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 34 5.5
UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage ... 33 7.2
UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61; Bacter... 33 7.2
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 33 9.5
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 203 bits (496), Expect = 4e-51
Identities = 94/125 (75%), Positives = 111/125 (88%)
Frame = +2
Query: 134 KTGXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 313
K HF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+Q
Sbjct: 13 KNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQ 72
Query: 314 VYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 493
VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK
Sbjct: 73 VYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGK 130
Query: 494 DKGKY 508
+KGKY
Sbjct: 131 EKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 173 bits (420), Expect = 6e-42
Identities = 82/120 (68%), Positives = 103/120 (85%)
Frame = +2
Query: 149 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 328
HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRGHY+GQQ+GKV+QVYRKK
Sbjct: 18 HFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRGHYEGQQIGKVVQVYRKK 77
Query: 329 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 508
+V+YI++++REKANG T VGIHPSK VI +LK+ +DRK IL+R+ +GK+KGKY
Sbjct: 78 YVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 140 bits (338), Expect = 6e-32
Identities = 68/120 (56%), Positives = 90/120 (75%)
Frame = +2
Query: 134 KTGXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 313
K+ HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG KG++ GKV
Sbjct: 14 KSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNKGRE-GKVTS 72
Query: 314 VYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 493
VYR K+ +++ERI R+K+NG + + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 73 VYRLKWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 136 bits (328), Expect = 9e-31
Identities = 66/102 (64%), Positives = 82/102 (80%), Gaps = 2/102 (1%)
Frame = +2
Query: 209 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATA 382
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 383 YVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 508
+VGIHPSK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 135 bits (327), Expect = 1e-30
Identities = 58/106 (54%), Positives = 86/106 (81%)
Frame = +2
Query: 149 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 328
HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV + RGH G++ GKV+++ RK+
Sbjct: 47 HFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICRGHNHGRE-GKVVKINRKR 105
Query: 329 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 466
F +Y+ER+ REKANG + ++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 106 FKIYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKILDRKA 151
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 130 bits (314), Expect = 5e-29
Identities = 61/115 (53%), Positives = 87/115 (75%)
Frame = +2
Query: 134 KTGXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 313
K +F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG KGQ+ GK+
Sbjct: 14 KARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE-GKISS 72
Query: 314 VYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 478
VYR KF V ++++ +EK NGA+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 73 VYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 128 bits (309), Expect = 2e-28
Identities = 65/114 (57%), Positives = 88/114 (77%)
Frame = +2
Query: 167 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 346
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++E
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVE 92
Query: 347 RIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 508
RI REK NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 93 RITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 120 bits (288), Expect = 6e-26
Identities = 58/123 (47%), Positives = 85/123 (69%)
Frame = +2
Query: 125 QXGKTGXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGK 304
Q K APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG +KG + GK
Sbjct: 10 QRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRGTHKGTK-GK 68
Query: 305 VMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAA 484
V VYRK++ + IE++ R KANG + I S+C+I K +N+DRK +L R+A +++
Sbjct: 69 VSSVYRKRWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASAKVST 128
Query: 485 LGK 493
GK
Sbjct: 129 KGK 131
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 111 bits (266), Expect = 3e-23
Identities = 53/108 (49%), Positives = 78/108 (72%)
Frame = +2
Query: 152 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 331
++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++GH K GKV V R K+
Sbjct: 19 YTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKGHQK--VAGKVTAVRRSKY 76
Query: 332 VVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 475
V+ I+++ + KANG T V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 77 VINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 98.7 bits (235), Expect = 2e-19
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
Frame = +2
Query: 125 QXGKTGXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGK 304
Q KT F+A + +S+ L+KE + VK +PIR+DDEV + G + G++ GK
Sbjct: 11 QAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSGKFAGRE-GK 69
Query: 305 VMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR--- 475
V+ V + + ++ REK NG T +V +HPS C+I KLKM+K RK +++RR GR
Sbjct: 70 VIAVKLSENRIVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGREKI 129
Query: 476 LAALGKDK 499
LA LG +K
Sbjct: 130 LAKLGHNK 137
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 89.4 bits (212), Expect = 1e-16
Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = +2
Query: 125 QXGKTGXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGK 304
Q K F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG + G+
Sbjct: 8 QPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE-GE 66
Query: 305 VMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RKAILDR 460
V++V K+ +Y+E E+ANG Y IHPS +I++ ++ R+ I++R
Sbjct: 67 VVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 87.8 bits (208), Expect = 3e-16
Identities = 49/103 (47%), Positives = 66/103 (64%)
Frame = +2
Query: 65 LAVSFWRXATXXSSTSRXLPQXGKTGXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPI 244
LAVS R A S+ KT HF+APS RR LMS+ LS EL+ + ++PI
Sbjct: 11 LAVSLRRHAMKYSTA--VTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPI 68
Query: 245 RKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 373
R +DEV+V RG +K ++ GKV+QVYRKK+V++I I R+K NG
Sbjct: 69 RVNDEVRVTRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/112 (40%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = +2
Query: 158 APSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVV 337
AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG + GKV +V K+ +
Sbjct: 20 APWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR-GKVTRVDYKRVRI 78
Query: 338 YIERIQREKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 490
Y++ +K +G Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 79 YVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/62 (64%), Positives = 53/62 (85%)
Frame = +2
Query: 179 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQR 358
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++RI
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISH 104
Query: 359 EK 364
EK
Sbjct: 105 EK 106
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 83.8 bits (198), Expect = 5e-15
Identities = 40/98 (40%), Positives = 67/98 (68%)
Frame = +2
Query: 152 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 331
F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG +KG + G+V++V K++
Sbjct: 17 FNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVIKVDLKRY 75
Query: 332 VVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 445
+Y+E ++ +G IHPS +I+KL +KD K
Sbjct: 76 RIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 82.2 bits (194), Expect = 2e-14
Identities = 43/119 (36%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = +2
Query: 152 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 331
++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G + GKV++V RK+
Sbjct: 14 YNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE-GKVVEVDRKRG 72
Query: 332 VVYIERIQREKANGATAYVGIHPSKCVIVKLKM-NKDRKAILDRRAKGRLAALGKDKGK 505
V IE + ++KA+G YV +H SK +I KL +K+R ++R+ K R K K
Sbjct: 73 RVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRKMREEYFSKKSPK 131
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 81.4 bits (192), Expect = 3e-14
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Frame = +2
Query: 149 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 328
+F+A + R +MSS LSKELR + +K+MPIR+ D V++ G +KG GKV++V R+
Sbjct: 18 YFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTGGHKG--TGKVVEVRRRD 75
Query: 329 FVVYIERIQREKANGATAYV--GIHPSKCVIVKLKMNKDRKAILDRRAK---GRLAALGK 493
+ + +E I ++ N V IHPS C+I +L MN R + RR + RLA +GK
Sbjct: 76 YKICVEGINQKARNPEAKPVPYPIHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 80.6 bits (190), Expect = 5e-14
Identities = 43/106 (40%), Positives = 62/106 (58%)
Frame = +2
Query: 152 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 331
+ AP HIR + +PLS EL+QK +K + +RK D V +VRG +KG + GKV V KK
Sbjct: 18 YDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHE-GKVTSVDVKKG 76
Query: 332 VVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 469
+++E KA+G IHPSK V+ +L ++ R+ L R K
Sbjct: 77 RIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 80.2 bits (189), Expect = 6e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +2
Query: 149 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 289
HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG YKG
Sbjct: 18 HFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRGSYKG 64
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 73.3 bits (172), Expect = 7e-12
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +2
Query: 191 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKAN 370
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + R+KA+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKAD 66
Query: 371 GATAYVGIHPSKCVIVKLKMNKD-RKAILDRRA 466
G Y+ IH SK I KL N RK I++R+A
Sbjct: 67 GTPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 68.1 bits (159), Expect = 3e-10
Identities = 36/109 (33%), Positives = 61/109 (55%)
Frame = +2
Query: 149 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 328
HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G + G++ G + ++ +
Sbjct: 19 HFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDGKE-GVISKINYRD 77
Query: 329 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 475
+ VYIE K +G A V I+PSK I K + RK L+R+ + R
Sbjct: 78 YKVYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 66.5 bits (155), Expect = 8e-10
Identities = 37/97 (38%), Positives = 63/97 (64%)
Frame = +2
Query: 155 SAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFV 334
+AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+ + K +
Sbjct: 31 NAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVIDIDPKYYR 89
Query: 335 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 445
VY+ + ++ HPSK I+KL ++ D+K
Sbjct: 90 VYLS-LDTDR------QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 60.5 bits (140), Expect = 5e-08
Identities = 33/108 (30%), Positives = 57/108 (52%)
Frame = +2
Query: 125 QXGKTGXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGK 304
Q K ++AP HIR+ M + LS+ L +++ +S + D V+++RG +KG + GK
Sbjct: 11 QPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKGTE-GK 69
Query: 305 VMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 448
V V + ++ + K +G I+PS +I KL+M R+A
Sbjct: 70 VQSVSLMDGTIAVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 59.3 bits (137), Expect = 1e-07
Identities = 37/91 (40%), Positives = 50/91 (54%)
Frame = +2
Query: 152 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKF 331
+ A + R + + SPLSKELR K+ +S+ + + D V VVRG YK GKV V +
Sbjct: 12 YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVSHVDTESG 70
Query: 332 VVYIERIQREKANGATAYVGIHPSKCVIVKL 424
V IE I++EK G V I SK V+ L
Sbjct: 71 SVAIEGIKKEKGKGDKFDVLIRASKVVVTGL 101
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = +2
Query: 197 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 376
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E I K +G
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGK 67
Query: 377 TAYVGIHPSKCVIVKLKMNKDRK 445
GI P K I L +++ +
Sbjct: 68 QKGFGISPEKLQITHLDLSRSER 90
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 55.6 bits (128), Expect = 2e-06
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = +2
Query: 185 MSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 364
+ S LSK+L++K+ +S+ + + D V ++RG +KG GKV +V K V IE +++EK
Sbjct: 23 LGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEK 81
Query: 365 ANGATAYVGIHPSKCVIVKL 424
G V IH S ++ L
Sbjct: 82 TKGDKFDVFIHTSNLLVTSL 101
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +2
Query: 197 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 376
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K V IE + KA+G
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEGVTISKADGK 68
Query: 377 TAYVGIHPSKCVIVKLKMNKD 439
I S I KL ++++
Sbjct: 69 QVPFFIDHSNISITKLDLSRN 89
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 51.6 bits (118), Expect = 3e-05
Identities = 24/81 (29%), Positives = 51/81 (62%)
Frame = +2
Query: 182 LMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQRE 361
++ + LSKE+++ K++ ++K+ E++V RG +KG + GKV+Q+ ++ ++++ I R
Sbjct: 29 IIKTNLSKEMQKYHKKKTLILKKNYEIKVKRGDFKG-KTGKVIQIKPEQQKIFVDNIFRN 87
Query: 362 KANGATAYVGIHPSKCVIVKL 424
K +V + PS I+K+
Sbjct: 88 KFEKTNIFVPLKPSNIQIIKI 108
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 50.0 bits (114), Expect = 8e-05
Identities = 25/96 (26%), Positives = 53/96 (55%)
Frame = +2
Query: 158 APSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVV 337
AP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+ V K V+
Sbjct: 15 APLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVINVDLDKAVI 73
Query: 338 YIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 445
++E + EK +G + S + L + +++
Sbjct: 74 HVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKR 109
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 41.9 bits (94), Expect = 0.021
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 227 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 364
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVNVAK 45
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 40.7 bits (91), Expect = 0.047
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Frame = +2
Query: 131 GKTGXXHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY--------- 283
GK AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 7 GKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDFGFPNSVKAE 66
Query: 284 -KGQQVGK----------VMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 424
+G+++G+ ++ V K VY++ + ++G + IHPS V+ KL
Sbjct: 67 ARGKRLGQSRGRSGVKSTIVGVDTKSGFVYVDGVTMTTSDGKEEALPIHPSNLVVTKL 124
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 37.5 bits (83), Expect = 0.44
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2
Query: 161 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVY 340
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +V
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 341 IERI 352
+E +
Sbjct: 64 VEGV 67
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 0.77
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 236 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 352
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 1.0
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -1
Query: 551 YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 438
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 34.3 bits (75), Expect = 4.1
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 230 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 364
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + K
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 33.9 bits (74), Expect = 5.5
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +2
Query: 242 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV 388
I+K D V VVRG KG+Q GKV++VY ER++R G YV
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVY--------ERVKRRDKQGNPVYV 45
>UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage
phiV10|Rep: Putative acetyltransferase - Phage phiV10
Length = 338
Score = 33.5 bits (73), Expect = 7.2
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = -2
Query: 448 CFAVF-IHLQLDNHTL*RVNADICCCTIGLFSLNPL--NVYNKL----FTIHLHHFANL- 293
CF VF I+ + N T+ + I CT+G++ ++PL ++ + ++IH F +
Sbjct: 254 CFMVFMINTPVKNKTILHIVKFISPCTLGIYLVHPLIIDILRRFLLDKYSIHPEMFIVIP 313
Query: 292 LAFVVSTYNLNFIVFANRHG 233
L+F+V +L +VF + G
Sbjct: 314 LSFIVFLISLAIVVFLRKFG 333
>UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2137
Score = 33.5 bits (73), Expect = 7.2
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 221 FNVKSMPIRKDDEVQVVRGHY-KGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 385
+ V MP++ E +++G Y K Q + ++F Y+ER EKA+ A+ Y
Sbjct: 88 YTVNPMPLKPSPEKSLIKGQYHKRMQSFQNATTNSREFASYLERRSPEKAHRASVY 143
>UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61;
Bacteria|Rep: 50S ribosomal protein L24 - Streptomyces
coelicolor
Length = 107
Score = 33.5 bits (73), Expect = 7.2
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 236 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 364
M I+K D VQV+ G KG+Q GKV+ + ++ V +E + R K
Sbjct: 1 MKIKKGDLVQVITGKDKGKQ-GKVIAAFPREDRVLVEGVNRVK 42
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 33.1 bits (72), Expect = 9.5
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 236 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 364
+ ++K DEV ++ G YKG++ GKV++V+ ++ V + + K
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGVNLVK 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,343,898
Number of Sequences: 1657284
Number of extensions: 10982601
Number of successful extensions: 25269
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 24481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25233
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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