Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D06
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0263 + 2136858-2137331                                          170   1e-42
12_01_0323 - 2459854-2460306                                          169   3e-42
11_01_0317 - 2365493-2365786,2365825-2365953                          132   5e-31

>01_01_0263 + 2136858-2137331
          Length = 157

 Score =  170 bits (414), Expect = 1e-42
 Identities = 81/120 (67%), Positives = 103/120 (85%)
 Frame = +2

Query: 149 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 328
           HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+QVYR++
Sbjct: 18  HFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQVYRRR 76

Query: 329 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 508
           +V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILDR+A+GR  A  K KGK+
Sbjct: 77  WVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKARGR--AADKAKGKF 134


>12_01_0323 - 2459854-2460306
          Length = 150

 Score =  169 bits (411), Expect = 3e-42
 Identities = 81/120 (67%), Positives = 102/120 (85%)
 Frame = +2

Query: 149 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 328
           HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+QVYR++
Sbjct: 18  HFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQVYRRR 76

Query: 329 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 508
           +V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILDR+A GR  A  K KGK+
Sbjct: 77  WVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 134


>11_01_0317 - 2365493-2365786,2365825-2365953
          Length = 140

 Score =  132 bits (318), Expect = 5e-31
 Identities = 70/120 (58%), Positives = 89/120 (74%)
 Frame = +2

Query: 149 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 328
           HF+APS +RRVLMS+ LS ELR K+NV             VRG YKG++ GKV+QVYR++
Sbjct: 18  HFTAPSSVRRVLMSAALSTELRHKYNV-------------VRGSYKGRE-GKVVQVYRRR 63

Query: 329 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 508
           +V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKAILDR+A GR  A  K KGK+
Sbjct: 64  WVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 121


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,446,390
Number of Sequences: 37544
Number of extensions: 314978
Number of successful extensions: 676
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)