Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D04
         (878 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   211   2e-56

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  211 bits (515), Expect = 2e-56
 Identities = 99/161 (61%), Positives = 114/161 (70%)
 Frame = +1

Query: 130 RKLYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXXXXXXX 309
           ++LYRKK SDVMR+LLRVR WQYRQ+TR HRAPRP RP + RRLGY+AK           
Sbjct: 8   QELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFSIFRIRVR 67

Query: 310 XXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSY 489
                       TYGKPKSHGVNQLKP R LQS+AEE            +SYWVAQD+++
Sbjct: 68  CGGRKRPVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYWVAQDAAH 127

Query: 490 KYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAG 612
           KYFEVI+VDP + AIRRDP +NWI NAVHKHRE+RGLTSAG
Sbjct: 128 KYFEVIMVDPPNNAIRRDPNVNWICNAVHKHRELRGLTSAG 168



 Score = 41.5 bits (93), Expect = 3e-05
 Identities = 20/30 (66%), Positives = 22/30 (73%)
 Frame = +3

Query: 633 GKGHXYSQTKGGSRRAAWLXRNTLQLRRKR 722
           GK + YSQT GGSRRAA + RN L LRR R
Sbjct: 175 GKAYRYSQTIGGSRRAAGVRRNRLHLRRYR 204


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,028
Number of Sequences: 2352
Number of extensions: 16013
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)