Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D03
         (861 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071117-1|AAL48739.1|  625|Drosophila melanogaster RE16905p pro...    29   6.2  
AE014134-1207|AAN10609.1|  625|Drosophila melanogaster CG9188-PE...    29   6.2  
AE014134-1206|AAN10608.1|  625|Drosophila melanogaster CG9188-PD...    29   6.2  
AE014134-1205|AAF52468.2|  625|Drosophila melanogaster CG9188-PA...    29   6.2  
AE014134-1204|AAN10607.2|  640|Drosophila melanogaster CG9188-PC...    29   6.2  
AE014134-1203|AAN10606.2|  657|Drosophila melanogaster CG9188-PB...    29   6.2  

>AY071117-1|AAL48739.1|  625|Drosophila melanogaster RE16905p
           protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = +1

Query: 217 SAVEXSKHLYEEKKSEVITNVVNKLIXNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDL 396
           S+V    H  ++   + + N  N L  N+ M  MEY  Q  ++ + G +  + +  +   
Sbjct: 312 SSVHGKDHTEQKPAEKSVENKENSLHFNDTMEEMEYMMQKGMEYMAGGAPSVAAVKADCP 371

Query: 397 SSPKTRLS 420
             PKT+ S
Sbjct: 372 VLPKTKQS 379


>AE014134-1207|AAN10609.1|  625|Drosophila melanogaster CG9188-PE,
           isoform E protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = +1

Query: 217 SAVEXSKHLYEEKKSEVITNVVNKLIXNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDL 396
           S+V    H  ++   + + N  N L  N+ M  MEY  Q  ++ + G +  + +  +   
Sbjct: 312 SSVHGKDHTEQKPAEKSVENKENSLHFNDTMEEMEYMMQKGMEYMAGGAPSVAAVKADCP 371

Query: 397 SSPKTRLS 420
             PKT+ S
Sbjct: 372 VLPKTKQS 379


>AE014134-1206|AAN10608.1|  625|Drosophila melanogaster CG9188-PD,
           isoform D protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = +1

Query: 217 SAVEXSKHLYEEKKSEVITNVVNKLIXNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDL 396
           S+V    H  ++   + + N  N L  N+ M  MEY  Q  ++ + G +  + +  +   
Sbjct: 312 SSVHGKDHTEQKPAEKSVENKENSLHFNDTMEEMEYMMQKGMEYMAGGAPSVAAVKADCP 371

Query: 397 SSPKTRLS 420
             PKT+ S
Sbjct: 372 VLPKTKQS 379


>AE014134-1205|AAF52468.2|  625|Drosophila melanogaster CG9188-PA,
           isoform A protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = +1

Query: 217 SAVEXSKHLYEEKKSEVITNVVNKLIXNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDL 396
           S+V    H  ++   + + N  N L  N+ M  MEY  Q  ++ + G +  + +  +   
Sbjct: 312 SSVHGKDHTEQKPAEKSVENKENSLHFNDTMEEMEYMMQKGMEYMAGGAPSVAAVKADCP 371

Query: 397 SSPKTRLS 420
             PKT+ S
Sbjct: 372 VLPKTKQS 379


>AE014134-1204|AAN10607.2|  640|Drosophila melanogaster CG9188-PC,
           isoform C protein.
          Length = 640

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = +1

Query: 217 SAVEXSKHLYEEKKSEVITNVVNKLIXNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDL 396
           S+V    H  ++   + + N  N L  N+ M  MEY  Q  ++ + G +  + +  +   
Sbjct: 327 SSVHGKDHTEQKPAEKSVENKENSLHFNDTMEEMEYMMQKGMEYMAGGAPSVAAVKADCP 386

Query: 397 SSPKTRLS 420
             PKT+ S
Sbjct: 387 VLPKTKQS 394


>AE014134-1203|AAN10606.2|  657|Drosophila melanogaster CG9188-PB,
           isoform B protein.
          Length = 657

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = +1

Query: 217 SAVEXSKHLYEEKKSEVITNVVNKLIXNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDL 396
           S+V    H  ++   + + N  N L  N+ M  MEY  Q  ++ + G +  + +  +   
Sbjct: 344 SSVHGKDHTEQKPAEKSVENKENSLHFNDTMEEMEYMMQKGMEYMAGGAPSVAAVKADCP 403

Query: 397 SSPKTRLS 420
             PKT+ S
Sbjct: 404 VLPKTKQS 411


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,258,230
Number of Sequences: 53049
Number of extensions: 483884
Number of successful extensions: 1128
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)