Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_D03
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associa... 29 3.2
AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin assoc... 29 3.2
U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical pr... 29 5.6
U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical pr... 29 5.6
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 28 7.4
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 28 7.4
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 9.8
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 9.8
>U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform b protein.
Length = 679
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 250 EKKSEVITNVVNKLIXNNKMNCMEY---AYQLWLQGLQGTSSGIVSQLSSDLSSPKTRLS 420
+K EV TN++N I +N ME+ Y W+ ++ T + +L + + L+
Sbjct: 166 KKHFEVGTNIMNLFIGTLCVNAMEHETKRYDFWIAEMKKTDQETLRKLKTAIRKQAMLLA 225
Query: 421 LCTSATVSL 447
C + +L
Sbjct: 226 ACVTFLTNL 234
>AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin
associated protein kap-1 protein.
Length = 679
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 250 EKKSEVITNVVNKLIXNNKMNCMEY---AYQLWLQGLQGTSSGIVSQLSSDLSSPKTRLS 420
+K EV TN++N I +N ME+ Y W+ ++ T + +L + + L+
Sbjct: 166 KKHFEVGTNIMNLFIGTLCVNAMEHETKRYDFWIAEMKKTDQETLRKLKTAIRKQAMLLA 225
Query: 421 LCTSATVSL 447
C + +L
Sbjct: 226 ACVTFLTNL 234
>U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical
protein T12A2.15b protein.
Length = 222
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 498 DGKDKTSPRVSWKLIALWENXKVYFKILNTERN 596
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152
>U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical
protein T12A2.15a protein.
Length = 713
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 498 DGKDKTSPRVSWKLIALWENXKVYFKILNTERN 596
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.3 bits (60), Expect = 7.4
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 88 PKMKPAIVILCLFVASLYAADS--DVPNDILEEXL-YNSVVVADYD-SAVEXSKHLYEEK 255
P +K +V LC+ +LY + S + ILE+ ++SV A S + EE
Sbjct: 922 PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981
Query: 256 KSEVITNVVNKLIXNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDLS 399
+ E N++N + C+E AY + G S + LS LS
Sbjct: 982 EPETYHNILN--VMPEGQACLEKAYDC----VNGIMSDLEEYLSEWLS 1023
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.3 bits (60), Expect = 7.4
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 88 PKMKPAIVILCLFVASLYAADS--DVPNDILEEXL-YNSVVVADYD-SAVEXSKHLYEEK 255
P +K +V LC+ +LY + S + ILE+ ++SV A S + EE
Sbjct: 922 PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981
Query: 256 KSEVITNVVNKLIXNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDLS 399
+ E N++N + C+E AY + G S + LS LS
Sbjct: 982 EPETYHNILN--VMPEGQACLEKAYDC----VNGIMSDLEEYLSEWLS 1023
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 111 NYSGLHLWSVESCVLPKNEXI 49
NY+ LH W +ES + P N+ +
Sbjct: 60 NYNNLHYWLIESQLTPSNDTL 80
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 111 NYSGLHLWSVESCVLPKNEXI 49
NY+ LH W +ES + P N+ +
Sbjct: 60 NYNNLHYWLIESQLTPSNDTL 80
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 111 NYSGLHLWSVESCVLPKNEXI 49
NY+ LH W +ES + P N+ +
Sbjct: 60 NYNNLHYWLIESQLTPSNDTL 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,639,267
Number of Sequences: 27780
Number of extensions: 244867
Number of successful extensions: 669
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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