Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D02
         (853 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    31   4.0  
CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.               31   5.3  
BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.       31   5.3  
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.                   31   7.0  
AF007190-1|AAC02268.1|  513|Homo sapiens intestinal mucin protein.     31   7.0  

>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 179 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 322
           T    +TT RTS  +P TTT+  T    + ++  T TVP       T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186



 Score = 30.3 bits (65), Expect = 9.3
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +2

Query: 164 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 340
           T    T T   TT  T++ +P TTT+  T T +STT  +  T      T+S+P++  ++
Sbjct: 148 TTVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTTTSVPVTTTVS 204


>CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.
          Length = 364

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +2

Query: 164 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 340
           T T    T   TT  T++ +P TTT++ T T +STT  +  T      T+S+P++  ++
Sbjct: 153 TTTVPMTTVPTTTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPVTTTVS 209


>BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.
          Length = 364

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +2

Query: 164 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 340
           T T    T   TT  T++ +P TTT++ T T +STT  +  T      T+S+P++  ++
Sbjct: 153 TTTVPMTTVPTTTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPVTTTVS 209


>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
          Length = 4861

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 167  PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLV 334
            P Q+  T + T+   S      ++ +E  T  +T V  T TVP ++    +PLSL+
Sbjct: 2626 PAQQAQTPVTTSPSASSTTSFMSSSLEDTTTATTPVTDTETVPASESPGVMPLSLL 2681


>AF007190-1|AAC02268.1|  513|Homo sapiens intestinal mucin protein.
          Length = 513

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
 Frame = +2

Query: 134 TLKPPLG*WKTPTQETATNLLTTAR----TSLILPKTTTLMETATNLSTTV---HITWTV 292
           T  PP+    TPT +T T++ TT      T+ + P T++++ +    ST V   H T T 
Sbjct: 380 TSTPPITSSITPT-DTMTSMRTTTSWPTATNTLSPLTSSILSSTPVPSTEVTTSHTTNTN 438

Query: 293 PKADLTSSLPLSLVLAVGSKE 355
           P + L ++LP+++  +  + E
Sbjct: 439 PVSTLVTTLPITITRSTLTSE 459


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,426,617
Number of Sequences: 237096
Number of extensions: 1697703
Number of successful extensions: 10634
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10630
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)