Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_D01
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456375-1|CAG30261.1| 384|Homo sapiens Em:AP000355.2 protein. 211 3e-54
BC139843-1|AAI39844.2| 389|Homo sapiens UPB1 protein protein. 211 3e-54
BC131703-1|AAI31704.1| 384|Homo sapiens UPB1 protein protein. 211 3e-54
AF169559-1|AAF06739.1| 387|Homo sapiens beta-ureidopropionase p... 211 3e-54
AF163312-1|AAF06735.1| 384|Homo sapiens beta-ureidopropionase p... 211 3e-54
AB013885-1|BAA88634.1| 384|Homo sapiens beta-ureidopropionase p... 211 3e-54
BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegati... 31 4.1
BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegati... 31 4.1
BC087834-1|AAH87834.1| 393|Homo sapiens suppressor of variegati... 31 4.1
BC065287-1|AAH65287.1| 393|Homo sapiens suppressor of variegati... 31 4.1
BC002522-1|AAH02522.2| 393|Homo sapiens suppressor of variegati... 31 4.1
AF151843-1|AAD34080.1| 384|Homo sapiens CGI-85 protein protein. 31 4.1
CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein. 31 5.4
BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair exon... 31 5.4
BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair exon... 31 5.4
BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair exon... 31 5.4
AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III (... 31 5.4
AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair exon... 31 5.4
AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 31 5.4
AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease TREX1... 31 5.4
AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 31 5.4
AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 31 5.4
AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1... 31 5.4
BC067357-1|AAH67357.1| 600|Homo sapiens CKAP4 protein protein. 30 9.4
>CR456375-1|CAG30261.1| 384|Homo sapiens Em:AP000355.2 protein.
Length = 384
Score = 211 bits (515), Expect = 3e-54
Identities = 98/165 (59%), Positives = 116/165 (70%)
Frame = +2
Query: 278 FPAKDEQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGXEGVNIICFQ 457
F A +EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQ
Sbjct: 59 FEAAEEQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQ 118
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLRELAIXYAMVIVSSILXRDXXHSDILW 637
E W MPFAFCTREK PW EFAES EDG TT F ++LA + MV+VS IL RD H D+LW
Sbjct: 119 EAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLW 178
Query: 638 NXXVVIXDXGNVIGKHRXXHIPXXGDFNXSXYYMEXNTGHPVFXT 772
N VVI + G V+GK R HIP GDFN S YYME N GHPVF T
Sbjct: 179 NTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQT 223
>BC139843-1|AAI39844.2| 389|Homo sapiens UPB1 protein protein.
Length = 389
Score = 211 bits (515), Expect = 3e-54
Identities = 98/165 (59%), Positives = 116/165 (70%)
Frame = +2
Query: 278 FPAKDEQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGXEGVNIICFQ 457
F A +EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQ
Sbjct: 59 FEAAEEQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQ 118
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLRELAIXYAMVIVSSILXRDXXHSDILW 637
E W MPFAFCTREK PW EFAES EDG TT F ++LA + MV+VS IL RD H D+LW
Sbjct: 119 EAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLW 178
Query: 638 NXXVVIXDXGNVIGKHRXXHIPXXGDFNXSXYYMEXNTGHPVFXT 772
N VVI + G V+GK R HIP GDFN S YYME N GHPVF T
Sbjct: 179 NTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQT 223
>BC131703-1|AAI31704.1| 384|Homo sapiens UPB1 protein protein.
Length = 384
Score = 211 bits (515), Expect = 3e-54
Identities = 98/165 (59%), Positives = 116/165 (70%)
Frame = +2
Query: 278 FPAKDEQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGXEGVNIICFQ 457
F A +EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQ
Sbjct: 59 FEAAEEQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQ 118
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLRELAIXYAMVIVSSILXRDXXHSDILW 637
E W MPFAFCTREK PW EFAES EDG TT F ++LA + MV+VS IL RD H D+LW
Sbjct: 119 EAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLW 178
Query: 638 NXXVVIXDXGNVIGKHRXXHIPXXGDFNXSXYYMEXNTGHPVFXT 772
N VVI + G V+GK R HIP GDFN S YYME N GHPVF T
Sbjct: 179 NTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQT 223
>AF169559-1|AAF06739.1| 387|Homo sapiens beta-ureidopropionase
protein.
Length = 387
Score = 211 bits (515), Expect = 3e-54
Identities = 98/165 (59%), Positives = 116/165 (70%)
Frame = +2
Query: 278 FPAKDEQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGXEGVNIICFQ 457
F A +EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQ
Sbjct: 59 FEAAEEQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQ 118
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLRELAIXYAMVIVSSILXRDXXHSDILW 637
E W MPFAFCTREK PW EFAES EDG TT F ++LA + MV+VS IL RD H D+LW
Sbjct: 119 EAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLW 178
Query: 638 NXXVVIXDXGNVIGKHRXXHIPXXGDFNXSXYYMEXNTGHPVFXT 772
N VVI + G V+GK R HIP GDFN S YYME N GHPVF T
Sbjct: 179 NTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQT 223
>AF163312-1|AAF06735.1| 384|Homo sapiens beta-ureidopropionase
protein.
Length = 384
Score = 211 bits (515), Expect = 3e-54
Identities = 98/165 (59%), Positives = 116/165 (70%)
Frame = +2
Query: 278 FPAKDEQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGXEGVNIICFQ 457
F A +EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQ
Sbjct: 59 FEAAEEQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQ 118
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLRELAIXYAMVIVSSILXRDXXHSDILW 637
E W MPFAFCTREK PW EFAES EDG TT F ++LA + MV+VS IL RD H D+LW
Sbjct: 119 EAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLW 178
Query: 638 NXXVVIXDXGNVIGKHRXXHIPXXGDFNXSXYYMEXNTGHPVFXT 772
N VVI + G V+GK R HIP GDFN S YYME N GHPVF T
Sbjct: 179 NTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQT 223
>AB013885-1|BAA88634.1| 384|Homo sapiens beta-ureidopropionase
protein.
Length = 384
Score = 211 bits (515), Expect = 3e-54
Identities = 98/165 (59%), Positives = 116/165 (70%)
Frame = +2
Query: 278 FPAKDEQTRPPRIVKVGVIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGXEGVNIICFQ 457
F A +EQ R PRIV VG++Q+ I +P + PV EQ A+ ++K I++VA GVNIICFQ
Sbjct: 59 FEAAEEQLRRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQ 118
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLRELAIXYAMVIVSSILXRDXXHSDILW 637
E W MPFAFCTREK PW EFAES EDG TT F ++LA + MV+VS IL RD H D+LW
Sbjct: 119 EAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLW 178
Query: 638 NXXVVIXDXGNVIGKHRXXHIPXXGDFNXSXYYMEXNTGHPVFXT 772
N VVI + G V+GK R HIP GDFN S YYME N GHPVF T
Sbjct: 179 NTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQT 223
>BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1, isoform 1 protein.
Length = 885
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLREL 565
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 885
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLREL 565
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>BC087834-1|AAH87834.1| 393|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 393
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLREL 565
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>BC065287-1|AAH65287.1| 393|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 393
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLREL 565
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>BC002522-1|AAH02522.2| 393|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 393
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLREL 565
+LW P AF + +P C+F +G D A LR++
Sbjct: 262 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 297
>AF151843-1|AAD34080.1| 384|Homo sapiens CGI-85 protein protein.
Length = 384
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 458 ELWNMPFAFCTREKQPWCEFAESGEDGATTTFLREL 565
+LW P AF + +P C+F +G D A LR++
Sbjct: 253 QLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDI 288
>CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein.
Length = 304
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
>BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
>BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
>BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 369
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 154 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 182
>AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III
(DNase III) protein.
Length = 304
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
>AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 89 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
>AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 99 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 127
>AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease
TREX1-like protein protein.
Length = 369
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 154 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 182
>AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 99 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 127
>AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 99 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 127
>AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 449 CFQE-LWNMPFAFCTREKQPWCEFAESGE 532
CF + L N+ AF R+ QPWC A +G+
Sbjct: 99 CFDDNLANLLLAFLRRQPQPWCLVAHNGD 127
>BC067357-1|AAH67357.1| 600|Homo sapiens CKAP4 protein protein.
Length = 600
Score = 30.3 bits (65), Expect = 9.4
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 593 TRSPLRTXWRVPEGRSWSPRLHLIRQTRTTAASPLCRTRR-AYSTTLGNR*C*HPLGR 423
TR R WR R S R R+TR++ S RTRR A + T C LGR
Sbjct: 47 TRRAARMTWRRSRRRRRSSRRRRPRRTRSSTRSSTRRTRRTARAATAAAASCSRRLGR 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,095,161
Number of Sequences: 237096
Number of extensions: 1448620
Number of successful extensions: 2436
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2431
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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