Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C24
         (943 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.15 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.20 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   0.79 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    27   0.82 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.8  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 0.15
 Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
 Frame = -1

Query: 535 PFPP--PXPXTPX-PPXLXPXPXPPPXPXPPXPLXXXXPLTPPXPPPXXP 395
           P PP  P P  P  PP   P   P   P PP       P     PPP  P
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRP 268



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
 Frame = -1

Query: 526 PPXPXTPXPPXLXPXPXPPPXP----XPPXPLXXXXPLTPPXPP 407
           P  P  P P  + P P   P P     PP  +    P   P PP
Sbjct: 206 PTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPP 249



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 14/45 (31%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
 Frame = -1

Query: 526 PPXPXTPXPPXLXPXPXPP-PXPXPPXPLXXXXPLTPPXPPPXXP 395
           PP    P        P PP P    P P     P+ P  PP   P
Sbjct: 194 PPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVP 238



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = -1

Query: 547 PXXXPFPPPXPXTPXPPXLXPXPXPPPXPXPPXPLXXXXPLTPP 416
           P   P PP       PP +     PPP   PP P+    P   P
Sbjct: 242 PGMQPRPPSAQGMQRPPMMGQ---PPPI-RPPNPMGGPRPQISP 281


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 16/52 (30%), Positives = 17/52 (32%)
 Frame = -1

Query: 550 SPXXXPFPPPXPXTPXPPXLXPXPXPPPXPXPPXPLXXXXPLTPPXPPPXXP 395
           +P    FP   P  P        P PPP   PP PL       P    P  P
Sbjct: 563 NPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
 Frame = -1

Query: 529 PPPXPXTPXPPX-LXPXPXPPPXPXPPXPLXXXXPLTPPXPPPXXP*XXXIXNXPL 365
           PPP      P   L P     P   P  P     P  PP PPP  P    +   PL
Sbjct: 549 PPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPP-APPPPPPMGPPPSPLAGGPL 603



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
 Frame = -1

Query: 535 PFPPPXPXTPXPPXLXPX-PXPPPXPXPPXPLXXXXPLTPPXPP 407
           PF P  P     P   P  P   P P PP P     P+ PP  P
Sbjct: 558 PFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP----PPMGPPPSP 597


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect(2) = 0.79
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 423 PPPXPPPXPLXL 388
           PPP PPP P  L
Sbjct: 783 PPPPPPPPPSSL 794



 Score = 21.8 bits (44), Expect(2) = 0.79
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 531 SPPPXPXPP 505
           SPPP P PP
Sbjct: 782 SPPPPPPPP 790


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 27.1 bits (57), Expect = 0.82
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 547 PXXXPFPPPXPXTPXPPXLXPXPXP 473
           P   PF PP   TP PP L     P
Sbjct: 790 PSNAPFTPPTDRTPTPPPLPATAEP 814


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 14/47 (29%), Positives = 16/47 (34%)
 Frame = -1

Query: 535 PFPPPXPXTPXPPXLXPXPXPPPXPXPPXPLXXXXPLTPPXPPPXXP 395
           P PPP      PP +      P    PP  L    P+    PP   P
Sbjct: 108 PLPPPMMGMRPPPMMV-----PTMGMPPMGLGMRPPVMSAAPPQLNP 149



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
 Frame = -1

Query: 523 PXPXTPXPPXLXPXPXPPPXPXPPXP-LXXXXPLTPP 416
           P P T  PP       PP    PP P +    P  PP
Sbjct: 64  PNPFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAPP 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,656
Number of Sequences: 2352
Number of extensions: 4596
Number of successful extensions: 112
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)