Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C23
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069307-1|AAL39452.1|  539|Drosophila melanogaster LD01582p pro...    30   4.8  
AE014134-70|AAF51521.1|  539|Drosophila melanogaster CG11604-PA ...    30   4.8  
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ...    29   6.4  
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC...    29   6.4  
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB...    29   6.4  
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA...    29   6.4  

>AY069307-1|AAL39452.1|  539|Drosophila melanogaster LD01582p
           protein.
          Length = 539

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -1

Query: 639 NKKTTATSGGLXAGSRATNSFSEGNWLQQSADTKYXSSSVAVVRPPLQEL 490
           N +   +SGG   GS + N  + GNW    ++     ++    R P QEL
Sbjct: 26  NNQQRRSSGGGGRGSHSQNRAANGNWPDAGSEGGQNGNAFNKFRDPQQEL 75


>AE014134-70|AAF51521.1|  539|Drosophila melanogaster CG11604-PA
           protein.
          Length = 539

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -1

Query: 639 NKKTTATSGGLXAGSRATNSFSEGNWLQQSADTKYXSSSVAVVRPPLQEL 490
           N +   +SGG   GS + N  + GNW    ++     ++    R P QEL
Sbjct: 26  NNQQRRSSGGGGRGSHSQNRAANGNWPDAGSEGGQNGNAFNKFRDPQQEL 75


>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
            protein SMRTER protein.
          Length = 3469

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 275  RHASRREKGGQVSGKRQGRXQESARGSFQGETPG 174
            +H   + KGGQ  G++QG+ Q   +G  QG+TPG
Sbjct: 1854 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 1883


>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
            isoform C protein.
          Length = 3604

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 275  RHASRREKGGQVSGKRQGRXQESARGSFQGETPG 174
            +H   + KGGQ  G++QG+ Q   +G  QG+TPG
Sbjct: 1989 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 2018


>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
            isoform B protein.
          Length = 3604

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 275  RHASRREKGGQVSGKRQGRXQESARGSFQGETPG 174
            +H   + KGGQ  G++QG+ Q   +G  QG+TPG
Sbjct: 1989 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 2018


>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
            isoform A protein.
          Length = 3604

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 275  RHASRREKGGQVSGKRQGRXQESARGSFQGETPG 174
            +H   + KGGQ  G++QG+ Q   +G  QG+TPG
Sbjct: 1989 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 2018


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,045,639
Number of Sequences: 53049
Number of extensions: 746454
Number of successful extensions: 2003
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)