Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C23
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical p...    30   2.5  
U97196-8|AAB52457.3|  191|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical...    28   7.7  

>U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical
           protein K07C11.10 protein.
          Length = 125

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -3

Query: 331 LERTTYTELRYLQREL*ESATLPEGRKADRYPVSGRVGXRRAHEGAS 191
           L+  T  +L  +QRE  E   +PEG+KA R P S      +++EG S
Sbjct: 66  LKTITTQKLEKMQREQMERLQVPEGQKA-RTPESAEAESPKSNEGPS 111


>U97196-8|AAB52457.3|  191|Caenorhabditis elegans Hypothetical
           protein B0207.2 protein.
          Length = 191

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/60 (28%), Positives = 23/60 (38%)
 Frame = +1

Query: 295 VGISVRCRSFAPSWAVCTNPPXQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARY 474
           VG  + C     +   C NP    + C L  +Y  E  PV  D +     TG R    R+
Sbjct: 21  VGTMLACALCIANPGACANPMWYTNFCLLLHDYMQEMYPVHPDGTSSPKMTGLRAQMQRH 80


>AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.10 protein.
          Length = 986

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +1

Query: 151 KPDRTIKIPGVSPWKLPRALSXFRPCRLPDTCPPFSLREAWRFLIAHAVGI 303
           K   +I +PGV   ++    S   PC LPD     +L E  R + A   G+
Sbjct: 220 KNHSSIHVPGVGDMRISNVTSLPDPCPLPDEIKKRALNEKERKVYAPFSGL 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,381,560
Number of Sequences: 27780
Number of extensions: 353420
Number of successful extensions: 766
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)