Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C23
         (879 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g07390.1 68418.m00846 respiratory burst oxidase protein A (Rb...    29   4.1  
At5g58040.1 68418.m07263 fip1 motif-containing protein contains ...    29   5.4  
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont...    28   9.5  
At1g34340.1 68414.m04262 esterase/lipase/thioesterase family pro...    28   9.5  

>At5g07390.1 68418.m00846 respiratory burst oxidase protein A
           (RbohA) / NADPH oxidase identical to respiratory burst
           oxidase protein A from Arabidopsis thaliana [gi:3242781]
          Length = 902

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 101 RPPDEHHKNRRSSQRW 148
           RPPDEH  NR  S+ W
Sbjct: 667 RPPDEHRLNRADSKHW 682


>At5g58040.1 68418.m07263 fip1 motif-containing protein contains Pfam
            profile PF05182: Fip1 motif
          Length = 1192

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -2

Query: 356  GGFVHTAQLGANDLH--RTEIPTA*AMRKRHASRREKGGQVSGKRQGR 219
            G  V T   G ND    R+EIP      KRH      G ++   ++GR
Sbjct: 1004 GSSVVTGSKGTNDARNCRSEIPHQPNTAKRHKENASSGDEIHDSKRGR 1051


>At1g74190.1 68414.m08592 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to Cf-2.1
           [Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
          Length = 965

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 486 STAYIPRSANPVTSGCCQWR*VVSYRV 406
           S + +P   N  TS CC+W+ V   RV
Sbjct: 48  SESVLPTWTNDTTSDCCRWKGVACNRV 74


>At1g34340.1 68414.m04262 esterase/lipase/thioesterase family
           protein similar to late embryogenesis abundant protein
           (EMB8) GI:1350544 SP|Q40863 from (Picea glauca);
           contains Interpro entry IPR000379
           esterase/lipase/thioesterase family
          Length = 530

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = -1

Query: 621 TSGGLXAGSRATNS-FSEGNWLQQSADTKYXSSSVAVVRPPLQELCSTAYIPRSANPVTS 445
           + GG  A    TNS   +G+   +S  TK  ++ +AVV P L    S+AY+   A     
Sbjct: 121 SDGGTIALDWLTNSDVLDGSLHNKSEITKEDTTPIAVVIPGLTSDSSSAYLKHLAYDTAK 180

Query: 444 GCCQWR*VVSYRVGL 400
               W  V+S   GL
Sbjct: 181 --TGWNVVISNHRGL 193


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,778,990
Number of Sequences: 28952
Number of extensions: 346072
Number of successful extensions: 920
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)