Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_C22
(886 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 152 1e-35
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 152 1e-35
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 150 4e-35
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 122 9e-27
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 120 5e-26
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 120 7e-26
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 114 2e-24
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 110 4e-23
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 109 9e-23
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 83 7e-15
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 82 2e-14
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 77 8e-13
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 75 3e-12
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 74 6e-12
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 67 6e-10
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 66 1e-09
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 62 1e-08
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 6e-06
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 41 0.036
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 40 0.064
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 39 0.19
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 36 1.0
UniRef50_Q3E3N3 Cluster: Phage tail sheath protein; n=2; Chlorof... 33 9.7
UniRef50_Q9BXF6 Cluster: Rab11 family-interacting protein 5; n=7... 33 9.7
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 152 bits (368), Expect = 1e-35
Identities = 75/106 (70%), Positives = 86/106 (81%)
Frame = +2
Query: 176 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 355
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 356 QLTVQNRXAQIAVVPSGSSPYHQSP*GASPVTVKSRKISKHNGNIS 493
+LT+QNR AQI VVPS S+ ++ P K +K KH+GNI+
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKAL-KEPPRDRKKQKNIKHSGNIT 137
Score = 38.7 bits (86), Expect = 0.19
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +3
Query: 498 EDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTV 611
+++V I + MR+RS ++KEILGTAQSVGC V
Sbjct: 139 DEIVNIVRQMRHRSLAR-ELSGTIKEILGTAQSVGCNV 175
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 152 bits (368), Expect = 1e-35
Identities = 75/106 (70%), Positives = 86/106 (81%)
Frame = +2
Query: 176 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 355
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 356 QLTVQNRXAQIAVVPSGSSPYHQSP*GASPVTVKSRKISKHNGNIS 493
+LT+QNR AQI VVPS S+ ++ P K +K KH+GNI+
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKAL-KEPPRDRKKQKNIKHSGNIT 105
Score = 40.3 bits (90), Expect = 0.064
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 498 EDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTV 611
+++V IA+ MR+RS ++KEILGTAQSVGC V
Sbjct: 107 DEIVNIARQMRHRSLAR-ELSGTIKEILGTAQSVGCNV 143
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 150 bits (364), Expect = 4e-35
Identities = 75/105 (71%), Positives = 85/105 (80%)
Frame = +2
Query: 176 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 355
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 356 QLTVQNRXAQIAVVPSGSSPYHQSP*GASPVTVKSRKISKHNGNI 490
LT+QNR A I+VVPS +S ++ P K +K KH+GNI
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKAL-KEPPRDRKKQKNIKHSGNI 246
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3
Query: 498 EDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTV 611
ED++ IA++MR RS + KE+LGTAQSVGCTV
Sbjct: 249 EDILAIARVMRPRSMAR-ELKGTCKEVLGTAQSVGCTV 285
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 122 bits (295), Expect = 9e-27
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = +2
Query: 173 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKI 349
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 350 TVQLTVQNRXAQIAVVPSGSS 412
TV+LTVQNR A+++VVP+ S+
Sbjct: 122 TVKLTVQNRQAKVSVVPTASA 142
Score = 43.6 bits (98), Expect = 0.007
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 480 TATSPLEDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCT 608
T L+D++ +A++MR +S +VKEILGTA+SVGCT
Sbjct: 164 TGNCSLDDIIEVARVMRPKSCAKN-LAGTVKEILGTAKSVGCT 205
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 120 bits (289), Expect = 5e-26
Identities = 61/107 (57%), Positives = 77/107 (71%)
Frame = +2
Query: 173 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKIT 352
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 353 VQLTVQNRXAQIAVVPSGSSPYHQSP*GASPVTVKSRKISKHNGNIS 493
QL V+NR A + V PS +S ++ P K K KH+GNI+
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRAL-KEPPRDRKKVKNIKHDGNIA 160
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 120 bits (288), Expect = 7e-26
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +2
Query: 212 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRXAQIA 391
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNR AQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 392 VVPSGSS 412
VVPS S+
Sbjct: 166 VVPSASA 172
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 114 bits (275), Expect = 2e-24
Identities = 66/131 (50%), Positives = 82/131 (62%), Gaps = 24/131 (18%)
Frame = +2
Query: 176 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW------- 334
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 335 -----------------KGLKITVQLTVQNRXAQIAVVPSGSSPYHQSP*GASPVTVKSR 463
KGL++TV+LT+QNR A ++VVPS SS ++ P K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKAL-KEPPRDRKKE 119
Query: 464 KISKHNGNISL 496
K KHN +I L
Sbjct: 120 KNIKHNKSIPL 130
Score = 40.3 bits (90), Expect = 0.064
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 492 PLEDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTV 611
PL+D++ IA+ MR+RS +V EILGTA SVGC V
Sbjct: 129 PLDDIIEIARTMRSRSLAK-ELKGTVLEILGTAFSVGCQV 167
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 110 bits (265), Expect = 4e-23
Identities = 49/107 (45%), Positives = 73/107 (68%)
Frame = +2
Query: 176 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 355
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 356 QLTVQNRXAQIAVVPSGSSPYHQSP*GASPVTVKSRKISKHNGNISL 496
L QNR A + V+P+ S+ + G K++ + KHNGN++L
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNV-KHNGNLTL 106
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 495 LEDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTVGXQ 620
LE V+ +A+ + +S TF +VK++LGTAQS+G TV Q
Sbjct: 106 LEQVIKVARAVEEKSLAK-TFTGTVKQVLGTAQSLGATVDGQ 146
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 109 bits (262), Expect = 9e-23
Identities = 55/95 (57%), Positives = 69/95 (72%)
Frame = +2
Query: 212 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRXAQIA 391
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNR A+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 392 VVPSGSSPYHQSP*GASPVTVKSRKISKHNGNISL 496
VVP+ +S + +P K K KHNGN+ +
Sbjct: 85 VVPTSASMVLKEL-NEAPRDRKKVKNIKHNGNLKI 118
Score = 39.9 bits (89), Expect = 0.084
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +3
Query: 495 LEDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTVGXQAAT 629
+E V IA+ M+ +S F +VKEILGT S+GCTV + T
Sbjct: 118 IEQVYSIARAMKEKSRAK-EFRGTVKEILGTCNSIGCTVDGKKPT 161
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +2
Query: 209 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 364
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 83.4 bits (197), Expect = 7e-15
Identities = 43/71 (60%), Positives = 48/71 (67%)
Frame = -2
Query: 402 EGTTAIWAXLF*TVSCTVILRPFQSLVALAMSSPTFLGDRPRGPILGAKDDVAPTSPPTH 223
+GTT A LF + TV L P SLVALA+SSPTF GD+P GPI GAK APTSPPT
Sbjct: 29 DGTTEAAACLFWIFNWTVTLIPLNSLVALAISSPTFFGDKPNGPIFGAKAAEAPTSPPTA 88
Query: 222 RKFTILISFGS 190
K+ L SFGS
Sbjct: 89 LKYKYLTSFGS 99
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 82.2 bits (194), Expect = 2e-14
Identities = 41/105 (39%), Positives = 64/105 (60%)
Frame = +2
Query: 176 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 355
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 356 QLTVQNRXAQIAVVPSGSSPYHQSP*GASPVTVKSRKISKHNGNI 490
++ +NR ++VVP+ SS ++ G P T+ + H G +
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKAL-GEGPRTIPKGQPLLHTGTV 104
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 76.6 bits (180), Expect = 8e-13
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Frame = +2
Query: 191 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 367
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 368 QNRXAQIAVVPSGSSPYHQSP*GASPVTVKSRKISKHNGNISL 496
++R A + V PS ++ +S P K K HNG++ +
Sbjct: 65 KDRKATVEVQPSVATLIIKSL-KEPPRDRKKEKNILHNGSLRM 106
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 495 LEDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTV 611
+ +VV IA+I R+ + +VKE+LGT +S+GC V
Sbjct: 106 MTEVVDIARIARSSRSYSNSLSGTVKEVLGTCKSIGCKV 144
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 74.5 bits (175), Expect = 3e-12
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 206 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-SDWKGLKITVQLTVQNRXA 382
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 383 QIAVVPSGSS 412
+ +VPS SS
Sbjct: 67 YLKIVPSVSS 76
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 73.7 bits (173), Expect = 6e-12
Identities = 49/136 (36%), Positives = 67/136 (49%)
Frame = -1
Query: 583 PRISFTEARKVPGPXDLFLMIFAMPTTSSKGDVAVVF*YFSAFYGHRGGSLRALMIRAAA 404
P+ F +R+ G L L + + KGDV+ V Y L +
Sbjct: 16 PQDLFNGSREFSGQR-LVLHLSSNVDNLIKGDVSTVL-YVFLLLSVSWWFLEGFDDQGRG 73
Query: 403 RGNNSYLGXSVLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADT 224
R + L SVL+ Q HSD +TLP+T LG+VI HLF RQT+ + GQ GTD P
Sbjct: 74 RRYHLNLSLSVLDRQFHSDPQTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGA 133
Query: 223 SQIHDFNFIWVKLRGH 176
Q+HDF+ + V+L H
Sbjct: 134 PQVHDFDLVGVELGWH 149
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 66.9 bits (156), Expect = 6e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 176 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 286
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
Score = 45.6 bits (103), Expect = 0.002
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = +3
Query: 495 LEDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTVGXQA 623
L+DV +AK+MR RS +VKEILGT QSVGCTV A
Sbjct: 76 LDDVTNVAKVMRPRSMARH-LSGTVKEILGTCQSVGCTVDGMA 117
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = -1
Query: 397 NNSYLGXSVLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQ 218
NN SVL+ QL+S+L+TL + GLG++ T+L QT+ T+ Q T+F D+SQ
Sbjct: 107 NNRSSSLSVLDLQLNSNLDTLEILGGLGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQ 166
Query: 217 IHDFNFIWVKLRGHFV 170
+ +FIW+KL HFV
Sbjct: 167 VQVLDFIWIKLWRHFV 182
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +2
Query: 182 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKK 298
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPKK
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPKK 169
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3
Query: 498 EDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTV 611
+++V IA+ MR+RS ++KE+LGTAQS+GC V
Sbjct: 210 DEIVNIARQMRHRSLDR-ELSGTIKELLGTAQSLGCNV 246
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 6e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -3
Query: 338 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 237
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 41.1 bits (92), Expect = 0.036
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +2
Query: 206 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRXAQ 385
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V +
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 386 IAV 394
+
Sbjct: 64 FEI 66
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 40.3 bits (90), Expect = 0.064
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 498 EDVVGIAKIMRNRSXGPGTFLASVKEILGTAQSVGCTV 611
+++V IA+ MR+RS ++KEILGTAQSVGC V
Sbjct: 197 DEIVNIARQMRHRSLAR-ELSGTIKEILGTAQSVGCNV 233
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 38.7 bits (86), Expect = 0.19
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 206 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 367
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIV 57
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 230 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 367
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTV 56
>UniRef50_Q3E3N3 Cluster: Phage tail sheath protein; n=2;
Chloroflexus|Rep: Phage tail sheath protein -
Chloroflexus aurantiacus J-10-fl
Length = 526
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 663 QSSAVDVINKIMWRPAXPQYIQLTVLCQESLLLR-PERYPG 544
Q++ + + P P Y+ TVL QESLLLR P+ YPG
Sbjct: 155 QAARRETFRNVSIDPTAPSYVG-TVLAQESLLLRVPDPYPG 194
>UniRef50_Q9BXF6 Cluster: Rab11 family-interacting protein 5; n=7;
Amniota|Rep: Rab11 family-interacting protein 5 - Homo
sapiens (Human)
Length = 653
Score = 33.1 bits (72), Expect = 9.7
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRXAQIAVVPSGSS 412
E+G SSL K GP LG SP KA S W GL+ T + + V P ++
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLREAKDPT--QKPSPHPVKPLSAA 533
Query: 413 PYHQSP 430
P SP
Sbjct: 534 PVEGSP 539
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,843,455
Number of Sequences: 1657284
Number of extensions: 14903661
Number of successful extensions: 36399
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 35085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36356
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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