Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C22
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.60 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.7  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 273 PILGAKDDVAPTSPPT 226
           PIL  K  V+PT+PPT
Sbjct: 85  PILAEKVSVSPTTPPT 100


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 409 QPLSSEPLRSLPGDRKKQ 462
           +PL SE L +LPG++ K+
Sbjct: 69  EPLLSEALTNLPGEKWKE 86


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 398 PSGSSPYHQS 427
           PSGSSP H S
Sbjct: 40  PSGSSPQHSS 49


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 398 PSGSSPYHQS 427
           PSGSSP H S
Sbjct: 40  PSGSSPQHSS 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,567
Number of Sequences: 336
Number of extensions: 3943
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)