Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C20
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    31   0.011
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          30   0.025
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      30   0.025
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          29   0.057
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      29   0.057
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.71 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.71 

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 31.5 bits (68), Expect = 0.011
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +3

Query: 78   LDNKPLGFPLDRPV 119
            LD KPLGFPLDRP+
Sbjct: 968  LDGKPLGFPLDRPL 981



 Score = 27.9 bits (59), Expect = 0.13
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +1

Query: 115  PLLMHYSRLPNMYFKDIFIYHEGE 186
            PL +    +PN++ KD+ ++H+G+
Sbjct: 980  PLSLGALSVPNIFVKDVLVFHQGQ 1003


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 30.3 bits (65), Expect = 0.025
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +1

Query: 139 LPNMYFKDIFIYH 177
           +PNMYFKD+FIY+
Sbjct: 665 IPNMYFKDVFIYN 677



 Score = 27.1 bits (57), Expect = 0.23
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 63  FESFVLDNKPLGFPLDRPV 119
           +    LD+K  GFPLDRP+
Sbjct: 640 YGKMTLDDKVFGFPLDRPM 658


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 30.3 bits (65), Expect = 0.025
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +1

Query: 139 LPNMYFKDIFIYH 177
           +PNMYFKD+FIY+
Sbjct: 665 IPNMYFKDVFIYN 677



 Score = 27.1 bits (57), Expect = 0.23
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 63  FESFVLDNKPLGFPLDRPV 119
           +    LD+K  GFPLDRP+
Sbjct: 640 YGKMTLDDKVFGFPLDRPM 658


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +1

Query: 142 PNMYFKDIFIYHEGE 186
           PNM FKDI IYH+ E
Sbjct: 663 PNMLFKDILIYHKDE 677



 Score = 27.5 bits (58), Expect = 0.17
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +3

Query: 9   FXTTSPTSGXP*XFTCAPFESFVLDNKPLGFPLDRPVVD 125
           F   SP S     +    +  +  D +  GFPLD+P+ D
Sbjct: 619 FLYVSPVSSEYNQYNSRIWGGYKFDKRSFGFPLDKPLYD 657


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +1

Query: 142 PNMYFKDIFIYHEGE 186
           PNM FKDI IYH+ E
Sbjct: 663 PNMLFKDILIYHKDE 677



 Score = 27.5 bits (58), Expect = 0.17
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +3

Query: 9   FXTTSPTSGXP*XFTCAPFESFVLDNKPLGFPLDRPVVD 125
           F   SP S     +    +  +  D +  GFPLD+P+ D
Sbjct: 619 FLYVSPVSSEYNQYNSRIWGGYKFDKRSFGFPLDKPLYD 657


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 75  VLDNKPLGFPLDRPV 119
           + D + +GFPLD+PV
Sbjct: 640 IYDGRAMGFPLDKPV 654


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 75  VLDNKPLGFPLDRPV 119
           + D + +GFPLD+PV
Sbjct: 640 IYDGRAMGFPLDKPV 654


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,466
Number of Sequences: 438
Number of extensions: 3072
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)