Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_C20
(895 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 33 0.26
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 33 0.34
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 31 1.0
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 29 5.5
At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein ... 29 5.5
At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein ... 29 5.5
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 7.3
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 28 7.3
At4g08370.1 68417.m01382 proline-rich extensin-like family prote... 28 7.3
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 28 7.3
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 28 9.6
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 9.6
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 9.6
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 9.6
At1g26240.1 68414.m03201 proline-rich extensin-like family prote... 28 9.6
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 28 9.6
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP P PP PPPP P
Sbjct: 438 PPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSP 497
Query: 879 XXXP 890
P
Sbjct: 498 PPPP 501
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP P PP PPPP P
Sbjct: 453 PPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSP 512
Query: 879 XXXP 890
P
Sbjct: 513 PPPP 516
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/86 (22%), Positives = 19/86 (22%)
Frame = +3
Query: 633 PPXXXPXXXXXPXXXXXXXFXXPXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXX 812
PP P P PP PP P PP P
Sbjct: 404 PPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPV 463
Query: 813 XPPXXXXXXXXPPPPXXXXXXPXXXP 890
P PPPP P P
Sbjct: 464 YSPPPPPPPPPPPPPVYSPPPPSPPP 489
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/82 (23%), Positives = 19/82 (23%)
Frame = +3
Query: 633 PPXXXPXXXXXPXXXXXXXFXXPXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXX 812
PP P P P PP PP P PP
Sbjct: 592 PPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSSPPPPPVYYSSP 651
Query: 813 XPPXXXXXXXXPPPPXXXXXXP 878
PP PPPP P
Sbjct: 652 PPPPVYYSSPPPPPPVHYSSPP 673
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/92 (22%), Positives = 22/92 (23%), Gaps = 6/92 (6%)
Frame = +3
Query: 633 PPXXXPXXXXXPXXXXXXXFXXPXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXX 812
PP P P + P PP PP P PP P
Sbjct: 461 PPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSS 520
Query: 813 XP------PXXXXXXXXPPPPXXXXXXPXXXP 890
P P PPPP P P
Sbjct: 521 PPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSP 552
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/74 (22%), Positives = 18/74 (24%)
Frame = +3
Query: 633 PPXXXPXXXXXPXXXXXXXFXXPXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXX 812
PP P P + P PP P P PP P
Sbjct: 541 PPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSS 600
Query: 813 XPPXXXXXXXXPPP 854
PP PPP
Sbjct: 601 PPPTPVYSPPPPPP 614
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/67 (23%), Positives = 17/67 (25%)
Frame = +3
Query: 690 FXXPXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXX 869
+ P PP PP P PP P P PPPP
Sbjct: 436 YSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVY 495
Query: 870 XXPXXXP 890
P P
Sbjct: 496 SPPPPPP 502
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/64 (25%), Positives = 16/64 (25%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP P P PP P PP PPPP P
Sbjct: 602 PPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSSPPPPPVYYSSPPPPPVYYSSP 661
Query: 879 XXXP 890
P
Sbjct: 662 PPPP 665
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/64 (25%), Positives = 16/64 (25%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP PP PPPP P
Sbjct: 603 PTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSSPPPPPVYYSSPPPPPVYYSSPP 662
Query: 879 XXXP 890
P
Sbjct: 663 PPPP 666
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 720 PPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXPXXXP 890
PP PP P PP P PP PPPP P P
Sbjct: 633 PPVVHYSSPPPPPVYYSSP---PPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPPPSP 686
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 720 PPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXPXXXP 890
PP PP P PP P PP PPPP P P
Sbjct: 1062 PPLPQESPPPLPPLPPSPPPPSPPLPPSSLPPPPPAALFPPLPPPPSQPPPPPLSPP 1118
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/74 (24%), Positives = 18/74 (24%)
Frame = +3
Query: 633 PPXXXPXXXXXPXXXXXXXFXXPXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXX 812
PP P P P PP PP P PP P
Sbjct: 376 PPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYP 435
Query: 813 XPPXXXXXXXXPPP 854
PP PPP
Sbjct: 436 PPPSPPYVYPPPPP 449
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/64 (25%), Positives = 16/64 (25%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP P PP PP P P
Sbjct: 388 PPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPPYVYPPP 447
Query: 879 XXXP 890
P
Sbjct: 448 PPSP 451
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/64 (25%), Positives = 16/64 (25%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP PP PPPP P
Sbjct: 377 PSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPP 436
Query: 879 XXXP 890
P
Sbjct: 437 PPSP 440
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/64 (25%), Positives = 16/64 (25%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP P P PPPP P
Sbjct: 386 PPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPPYVYP 445
Query: 879 XXXP 890
P
Sbjct: 446 PPPP 449
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/82 (23%), Positives = 20/82 (24%)
Frame = +3
Query: 633 PPXXXPXXXXXPXXXXXXXFXXPXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXX 812
PP P P + P PP PP P PP P
Sbjct: 391 PPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPP-----PPSPPYVYP 445
Query: 813 XPPXXXXXXXXPPPPXXXXXXP 878
PP P PP P
Sbjct: 446 PPPPSPQPYMYPSPPCNDLPTP 467
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 720 PPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXPXXXP 890
PP PP P PP P PP PPPP P P
Sbjct: 405 PPIVALPPPPPPSPPLPPPVYSPP-PSPPVFSPPPSPPVYSPPPPPSIHYSSPPPPP 460
>At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 308 SFYIFFG-YYGCKIHQFIKI*FFGTTLDCV 222
+FY+FF + G KIHQ+I + + + CV
Sbjct: 27 AFYVFFAPFVGKKIHQYIAMGIYTPLITCV 56
>At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 308 SFYIFFG-YYGCKIHQFIKI*FFGTTLDCV 222
+FY+FF + G KIHQ+I + + + CV
Sbjct: 27 AFYVFFAPFVGKKIHQYIAMGIYTPLITCV 56
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 720 PPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXPXXXP 890
PP PP P PP P PP PPPP P P
Sbjct: 528 PPVYSPPPPPPPVHSPPPPVHSPPPPPVYSPPPPPPPVHS--PPPPVFSPPPPVYSP 582
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/60 (25%), Positives = 15/60 (25%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP PP P PP PPPP P
Sbjct: 116 PPTVKPPPPPTPYTPPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPPP 175
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/60 (25%), Positives = 15/60 (25%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP P P PPPP P
Sbjct: 117 PTVKPPPPPTPYTPPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPPPP 176
>At4g08370.1 68417.m01382 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 350
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 720 PPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXPXXXP 890
PP PP P PP P PP PPPP P P
Sbjct: 36 PPQPYVYSPPLPSPYVYKSP--PPSPYLYSSPPPPPYVYNSPPPPPPYIYNSPPRPP 90
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 720 PPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXPXXXP 890
PP PP P PP P PP PPPP P P
Sbjct: 67 PPPYVYNSPPPPPPYIYNS---PPRPPYVYKSPPPPPFVYSSPPPPTYIYNSPPPPP 120
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP P PP PPPP P
Sbjct: 154 PYVYKSPPPPPYVYSPPPPPPYVYQS---PPPPPYVYSSPPPPPYVYKSPPPPPYVYSSP 210
Query: 879 XXXP 890
P
Sbjct: 211 PPPP 214
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP P PP PPPP P
Sbjct: 55 PPPYVYKPPPYIYSSPPPPPYVYSS----PPPPPYVYNSPPPPPYVYSSPPPPPYVYKSP 110
Query: 879 XXXP 890
P
Sbjct: 111 PPPP 114
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 720 PPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXPXXXP 890
PP PP P PP P PP PPPP P P
Sbjct: 302 PPPYVYSSPPPPPYVYKSP---PPPPYVYTSPPPPPYVYKSPPPPPYVDSYSPPPAP 355
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +3
Query: 744 PPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
PP P PP P PP PPPP P
Sbjct: 693 PPPPPMQHSTVTKVPPPPPPAPPAPPTPIVHTSSPPPPPPPPPPP 737
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/66 (25%), Positives = 17/66 (25%), Gaps = 2/66 (3%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPP--XXXXXXXXPPPPXXXXX 872
P PP PP P PP P PP PPPP
Sbjct: 737 PPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPP 796
Query: 873 XPXXXP 890
P P
Sbjct: 797 PPVHSP 802
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = +3
Query: 720 PPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
PP PP P P P PP PPPP P
Sbjct: 495 PPPVHSPPPPSPIHSPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPVHSPPP 547
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/87 (22%), Positives = 20/87 (22%), Gaps = 1/87 (1%)
Frame = +3
Query: 633 PPXXXPXXXXXPXXXXXXXFXXPXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXX 812
PP P P P PP PP P PP P
Sbjct: 501 PPPPSPIHSPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPP 560
Query: 813 XP-PXXXXXXXXPPPPXXXXXXPXXXP 890
P PPPP P P
Sbjct: 561 PPVHSPPPPVHSPPPPVHSPPPPVYSP 587
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP P PP PPPP P
Sbjct: 580 PPPPVYSPPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPP----PVHSPPPPVFSPPPP 635
Query: 879 XXXP 890
P
Sbjct: 636 VHSP 639
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/60 (25%), Positives = 15/60 (25%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP PP P PP PPPP P
Sbjct: 538 PPMPSPSPPSPIYSPPPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPP 597
>At1g26240.1 68414.m03201 proline-rich extensin-like family protein
similar to hydroxyproline-rich glycoprotein precursor
gi|727264|gb|AAA87902; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 478
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 699 PXXXXXXPPXXXXXXPPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
P PP PP P PP P PP PPPP P
Sbjct: 35 PPSYVYKPPTHIYSSPPPPPYVYSS----PPPPPYIYKSPPPPPYVYSSPPPPPYIYKSP 90
Query: 879 XXXP 890
P
Sbjct: 91 PPPP 94
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +3
Query: 744 PPXPXXXXXXXXXXPPXPXXXXXXPPXXXXXXXXPPPPXXXXXXP 878
PP P PP P PP PPPP P
Sbjct: 461 PPSPSPPPPYVYSSPPPPYVYSSPPPPPYVYSSPPPPPYVYSSPP 505
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,302,221
Number of Sequences: 28952
Number of extensions: 199666
Number of successful extensions: 1292
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2100696768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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