Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C19
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1204 + 34936696-34936698,34936809-34936944,34937794-349378...    57   2e-08
08_01_0195 + 1612938-1613003,1613026-1613161,1614624-1614725,161...    56   4e-08
02_01_0089 + 633642-633644,633728-633863,635356-635457,635565-63...    56   4e-08
03_05_0756 + 27469002-27469107,27469200-27469369,27470210-274710...    30   2.8  

>02_05_1204 +
           34936696-34936698,34936809-34936944,34937794-34937895,
           34938153-34938199
          Length = 95

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = +3

Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
           GR S HLQ S C+ CG PAA+    +WSV A R +  GTGRMR+L+ V
Sbjct: 23  GRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYLRHV 70


>08_01_0195 +
           1612938-1613003,1613026-1613161,1614624-1614725,
           1614833-1614876
          Length = 115

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +3

Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
           GR S HLQ S C+ CG PAA+    +WSV A R +  GTGRMR+++ V
Sbjct: 44  GRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHV 91


>02_01_0089 +
           633642-633644,633728-633863,635356-635457,635565-635608
          Length = 94

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +3

Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
           GR S HLQ S C+ CG PAA+    +WSV A R +  GTGRMR+++ V
Sbjct: 23  GRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHV 70


>03_05_0756 +
           27469002-27469107,27469200-27469369,27470210-27471001,
           27471182-27471398,27471972-27472150,27472592-27472833,
           27473662-27474052
          Length = 698

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +2

Query: 95  ASVXRRXXPPSVSAVRCWSLVISPSXIKMRP----MWXSCSKIXLLPLVXXGSAXAASWN 262
           A++ +R    +VS   C  +V S    K  P    ++ S SKI ++P++  GSA A+S  
Sbjct: 66  AALRKRFEAMNVSDAACAGVVKSVLCAKCNPYSAELFNSSSKIRMVPVLCNGSASASSTQ 125

Query: 263 WPHASFEACQ 292
              ++ + C+
Sbjct: 126 SKDSTQDYCK 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,590,704
Number of Sequences: 37544
Number of extensions: 154624
Number of successful extensions: 258
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)