Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_C19
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37 pro... 56 1e-07
D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37 pro... 56 1e-07
CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein. 56 1e-07
BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein. 56 1e-07
BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37 p... 56 1e-07
AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37 p... 56 1e-07
S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37 pro... 54 7e-07
AB007183-1|BAA25842.1| 27|Homo sapiens ribosomal protein L37 p... 35 0.33
AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA seq... 31 5.5
AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA seq... 31 5.5
>L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
G + HLQ S C +CG PA + +WS A+R GTGRMRHLK+V
Sbjct: 23 GSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIV 70
>D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
G + HLQ S C +CG PA + +WS A+R GTGRMRHLK+V
Sbjct: 23 GSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIV 70
>CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein.
Length = 97
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
G + HLQ S C +CG PA + +WS A+R GTGRMRHLK+V
Sbjct: 23 GSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIV 70
>BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein.
Length = 97
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
G + HLQ S C +CG PA + +WS A+R GTGRMRHLK+V
Sbjct: 23 GSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIV 70
>BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
G + HLQ S C +CG PA + +WS A+R GTGRMRHLK+V
Sbjct: 23 GSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIV 70
>AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
G + HLQ S C +CG PA + +WS A+R GTGRMRHLK+V
Sbjct: 23 GSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIV 70
>S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 54.0 bits (124), Expect = 7e-07
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +3
Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLKLV 290
G + HLQ S C +CG PA + +WS A+R GTGRM HLK+V
Sbjct: 23 GSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMSHLKIV 70
>AB007183-1|BAA25842.1| 27|Homo sapiens ribosomal protein L37
protein.
Length = 27
Score = 35.1 bits (77), Expect = 0.33
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 222 HWSVXAQRXQPPGTGRMRHLKLV 290
+WS A+R GTGRMRHLK+V
Sbjct: 1 NWSAKAKRRNTTGTGRMRHLKIV 23
>AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 436
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 173 IKMRPMWXSCSKIXLLPLVXXGSAXAASW 259
IK RP W CSK LP V + SW
Sbjct: 253 IKRRPPWQICSKFGALPFVAEKPSRTTSW 281
>AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 360
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 173 IKMRPMWXSCSKIXLLPLVXXGSAXAASW 259
IK RP W CSK LP V + SW
Sbjct: 177 IKRRPPWQICSKFGALPFVAEKPSRTTSW 205
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,228,913
Number of Sequences: 237096
Number of extensions: 787839
Number of successful extensions: 1127
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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