Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C19
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    47   2e-05
AF067612-4|AAM98010.1|  749|Caenorhabditis elegans Egg laying de...    28   7.6  
AF067612-3|AAU05567.1|  743|Caenorhabditis elegans Egg laying de...    28   7.6  
AF067612-2|AAD36953.1|  737|Caenorhabditis elegans Egg laying de...    28   7.6  
AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying de...    28   7.6  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = +3

Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLK 284
           G+ S H+Q  +CA CG P AK  + +W   + R +  GTGR RHL+
Sbjct: 23  GKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTRHLR 68


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +3

Query: 147 GRXSSHLQXSKCAQCGSPAAKXXSSHWSVXAQRXQPPGTGRMRHLK 284
           G+ S H+Q  +CA CG   AK  + +W   + R +  GTGR RHL+
Sbjct: 23  GKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLR 68


>AF067612-4|AAM98010.1|  749|Caenorhabditis elegans Egg laying
           defective protein 4,isoform c protein.
          Length = 749

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 198 EXHIGRILXFEGEMTSDQQRTAETEGGXXRRXTEAXGPGG 79
           E HI RI   EGE+T+ Q+   +      ++   A  PGG
Sbjct: 60  EGHIKRISELEGEVTTLQRECDKLRSVLEQKAQSAASPGG 99


>AF067612-3|AAU05567.1|  743|Caenorhabditis elegans Egg laying
           defective protein 4,isoform e protein.
          Length = 743

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 198 EXHIGRILXFEGEMTSDQQRTAETEGGXXRRXTEAXGPGG 79
           E HI RI   EGE+T+ Q+   +      ++   A  PGG
Sbjct: 54  EGHIKRISELEGEVTTLQRECDKLRSVLEQKAQSAASPGG 93


>AF067612-2|AAD36953.1|  737|Caenorhabditis elegans Egg laying
           defective protein 4,isoform b protein.
          Length = 737

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 198 EXHIGRILXFEGEMTSDQQRTAETEGGXXRRXTEAXGPGG 79
           E HI RI   EGE+T+ Q+   +      ++   A  PGG
Sbjct: 48  EGHIKRISELEGEVTTLQRECDKLRSVLEQKAQSAASPGG 87


>AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying
           defective protein 4,isoform a protein.
          Length = 780

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 198 EXHIGRILXFEGEMTSDQQRTAETEGGXXRRXTEAXGPGG 79
           E HI RI   EGE+T+ Q+   +      ++   A  PGG
Sbjct: 91  EGHIKRISELEGEVTTLQRECDKLRSVLEQKAQSAASPGG 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,873,296
Number of Sequences: 27780
Number of extensions: 104374
Number of successful extensions: 143
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)