Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C18
         (892 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   4.1  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   5.4  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    24   7.1  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 516 GKCRAEHKMNLRVASTRRFACTDVEDLRH 430
           GKCR+ H    +V     F   + E++RH
Sbjct: 748 GKCRSIHLHRGQVLDADSFRANEQEEIRH 776


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/39 (20%), Positives = 20/39 (51%)
 Frame = +3

Query: 333 LTFQKITRIVTAVDSQPMFDGGVLINVLGRLKCDEDPPH 449
           LT+ +   I+ ++D+ P  +  + ++V+G     +   H
Sbjct: 149 LTYHQFQAIIASMDAPPQPEAAITLDVIGNANTPQYDDH 187


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 192 VQQYYTLFDDPAQRANLVNMYNVET 266
           + + YT+FD+     +  N+Y VET
Sbjct: 529 LNELYTIFDELTDSKSNSNIYKVET 553


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 863,093
Number of Sequences: 2352
Number of extensions: 16341
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)