Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C18
         (892 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   6.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.5  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   6.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   8.6  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 383 WLGIHSSYYSSDFLKSQT 330
           W+GIH    +SD   +QT
Sbjct: 353 WMGIHEPETTSDATSAQT 370


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +3

Query: 192 VQQYYTLFD---DPAQRANLVNMYNVETSFMTFEGV 290
           + Q YT FD   DP +  N+  +  V   +M   G+
Sbjct: 440 LNQLYTAFDVLTDPKKNPNVYKVETVGDKYMAVSGL 475


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 383 WLGIHSSYYSSDFLKSQT 330
           W+GIH    +SD   +QT
Sbjct: 353 WMGIHEPETTSDATSAQT 370


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +3

Query: 192 VQQYYTLFD---DPAQRANLVNMYNVETSFMTFEGV 290
           + Q YT FD   DP +  N+  +  V   +M   G+
Sbjct: 440 LNQLYTAFDVLTDPKKNPNVYKVETVGDKYMAVSGL 475


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +1

Query: 649 CIYFVKEFMKLKGLXDYEIMIMIDLXIEQGNLK*EFGFHYTXNGDKL 789
           C+ F ++  + K L D +I+    +   + NLK +    Y  NG+++
Sbjct: 117 CLKFEEQKRRKKSLDDVKILRNDRIDSYKSNLKCDKCSTYQSNGEEV 163


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 389 KHWLGIHSSYYS 354
           K+WL +H+SY S
Sbjct: 436 KNWLPVHTSYKS 447


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,845
Number of Sequences: 438
Number of extensions: 5123
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)