Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_C17
(904 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 151 3e-35
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 150 5e-35
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 146 5e-34
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 146 7e-34
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 140 4e-32
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 127 4e-28
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 126 6e-28
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 126 1e-27
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 124 4e-27
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 121 2e-26
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 120 7e-26
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 118 2e-25
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 113 4e-24
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 111 3e-23
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 109 9e-23
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 106 7e-22
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 98 2e-19
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 89 2e-16
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 88 3e-16
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 86 1e-15
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 80 9e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 76 1e-12
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 76 1e-12
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 75 2e-12
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 74 6e-12
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 69 1e-10
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 62 2e-08
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 62 2e-08
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 61 3e-08
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 59 1e-07
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 59 2e-07
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 46 0.002
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 44 0.005
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.022
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 41 0.038
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 41 0.038
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.35
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.9
UniRef50_Q0FPW5 Cluster: Tellurite resistance protein; n=1; Rose... 35 2.5
UniRef50_UPI0000E205E8 Cluster: PREDICTED: hypothetical protein;... 35 3.3
UniRef50_UPI0000EBC636 Cluster: PREDICTED: hypothetical protein;... 34 4.3
UniRef50_A3C5V0 Cluster: Putative uncharacterized protein; n=2; ... 34 5.7
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 5.7
UniRef50_A2ZSM5 Cluster: Putative uncharacterized protein; n=6; ... 34 5.7
UniRef50_P90580 Cluster: FCR3-varT11-1 protein; n=23; Plasmodium... 34 5.7
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 7.5
UniRef50_A0CGY6 Cluster: Chromosome undetermined scaffold_18, wh... 33 7.5
UniRef50_A2ZKP9 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 33 10.0
UniRef50_Q96KW2 Cluster: POM121-like protein 2; n=4; Eutheria|Re... 33 10.0
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 151 bits (365), Expect = 3e-35
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 46 KNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
Query: 473 KPWRRWHRRVN 505
K WRRWHRRVN
Sbjct: 106 KTWRRWHRRVN 116
Score = 128 bits (310), Expect = 1e-28
Identities = 59/92 (64%), Positives = 74/92 (80%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 139 SKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
Query: 753 RRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
RRRIQR+GP G+ +AFRNIPG+ LL
Sbjct: 199 RRRIQRRGPCIIYNEDNGIIKAFRNIPGITLL 230
Score = 34.7 bits (76), Expect = 3.3
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 235 VFKAPIRPDLVNDVHVSMSK 294
VFKAPIRPD+VN VH ++ K
Sbjct: 27 VFKAPIRPDIVNFVHTNLRK 46
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 150 bits (363), Expect = 5e-35
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N RQPY VS EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 163 KNKRQPYAVSVEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 222
Query: 473 KPWRRWHRRVNLRTAESGLGSSR 541
K +RRWHRRVN+ + S+R
Sbjct: 223 KVFRRWHRRVNVAQKRYAMVSAR 245
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 146 bits (355), Expect = 5e-34
Identities = 65/91 (71%), Positives = 82/91 (90%)
Frame = +3
Query: 576 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 755
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 756 RRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
RR+ RKGP + +GLTR+FRNIPGV+++
Sbjct: 65 RRLHRKGPLIIYNKDQGLTRSFRNIPGVDMV 95
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 146 bits (354), Expect = 7e-34
Identities = 75/126 (59%), Positives = 86/126 (68%)
Frame = +2
Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340
ARPL SV + P + + P + + P L RN+RQ Y VS+ AGHQ
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64
Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 521 SGLGSS 538
L S+
Sbjct: 125 YALVSA 130
Score = 128 bits (308), Expect = 3e-28
Identities = 58/93 (62%), Positives = 75/93 (80%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
+RRRI R+GP + GL +AFRNIPG+E +
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 140 bits (339), Expect = 4e-32
Identities = 58/72 (80%), Positives = 66/72 (91%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N RQPY VS++AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 45 KNKRQPYAVSEKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 104
Query: 473 KPWRRWHRRVNL 508
K WR+WH+++NL
Sbjct: 105 KVWRKWHQKINL 116
Score = 76.6 bits (180), Expect = 8e-13
Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 743
ARGH I ++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAGKGK
Sbjct: 138 ARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGK 197
Query: 744 MRNRRRIQRKGP---S*SSTRIRGLTRAFRNIPGVE 842
+R RR QR+GP +T + L RAFRN+PGVE
Sbjct: 198 LRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGVE 233
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 127 bits (306), Expect = 4e-28
Identities = 52/82 (63%), Positives = 65/82 (79%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT
Sbjct: 45 KNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPT 104
Query: 473 KPWRRWHRRVNLRTAESGLGSS 538
+ WRRWHR+VNL+ L S+
Sbjct: 105 RVWRRWHRKVNLKEKRQALASA 126
Score = 58.0 bits (134), Expect = 3e-07
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
+RGH IE + E+P+VV D +++INKTK AV L + +++ ++ K G+ R+
Sbjct: 138 SRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKV------TGRARD 191
Query: 753 RRRIQRKGP--S*SSTRIRGLTRAFRNIPGVEL 845
R+ + GP +T + G RAFRNIPGVE+
Sbjct: 192 GRKKRPVGPLIILRATAVEG-KRAFRNIPGVEV 223
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 126 bits (305), Expect = 6e-28
Identities = 56/82 (68%), Positives = 64/82 (78%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N R PY V AG++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PT
Sbjct: 46 KNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPT 105
Query: 473 KPWRRWHRRVNLRTAESGLGSS 538
K WRRW R++NL+ + SS
Sbjct: 106 KIWRRWGRKINLKEKRYAVCSS 127
Score = 76.2 bits (179), Expect = 1e-12
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
ARGH I + E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRN
Sbjct: 139 ARGHRISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRN 198
Query: 753 RRRIQRKGPS*SSTRIRGLTRAFRNIPGVEL 845
R+ GP + G+ +AFRNIPGV+L
Sbjct: 199 RKYKISNGPLIIYSXDSGIKKAFRNIPGVDL 229
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 126 bits (303), Expect = 1e-27
Identities = 54/89 (60%), Positives = 65/89 (73%)
Frame = +2
Query: 296 NSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 475
+++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK
Sbjct: 23 STKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTK 82
Query: 476 PWRRWHRRVNLRTAESGLGSSRCCYRRPS 562
WR+WH+++NL S+ P+
Sbjct: 83 VWRKWHQKINLNQKRFATASALAASGSPA 111
Score = 74.9 bits (176), Expect = 2e-12
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKV---QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 743
ARGH + +PE+PLV++ I KT AV L+ + A +D K S++LRAGKGK
Sbjct: 115 ARGHNVSTVPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGK 174
Query: 744 MRNRRRIQRKGP---S*SSTRIRGLTRAFRNIPGVE 842
+R RR QR+GP + L +AFRNIPGVE
Sbjct: 175 LRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVE 210
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 124 bits (298), Expect = 4e-27
Identities = 67/135 (49%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Frame = +2
Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFL-CPRNSRQPYCVSKEAGH 337
ARP SV SA V G P + +R+ + F +NSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTCPLPAVFTAP---IRSDIVKFVHTNMAKNSRQAYAVNRLSGM 59
Query: 338 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTA 517
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWHR++NL
Sbjct: 60 NHSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQK 119
Query: 518 ESGLGSSRCCYRRPS 562
+ S+ PS
Sbjct: 120 RFAVVSALAASSVPS 134
Score = 91.5 bits (217), Expect = 3e-17
Identities = 45/91 (49%), Positives = 63/91 (69%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
+RGH I +PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRN
Sbjct: 138 SRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRN 197
Query: 753 RRRIQRKGPS*SSTRIRGLTRAFRNIPGVEL 845
RR + R+GP +G TRAFRNI G++L
Sbjct: 198 RRYVARRGPMLVMPNNKG-TRAFRNIFGLDL 227
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 121 bits (292), Expect = 2e-26
Identities = 49/82 (59%), Positives = 62/82 (75%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT
Sbjct: 45 KNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPT 104
Query: 473 KPWRRWHRRVNLRTAESGLGSS 538
+ WR WHR++NL+ L S
Sbjct: 105 RTWRHWHRKINLKEKRLALAVS 126
Score = 56.0 bits (129), Expect = 1e-06
Identities = 34/92 (36%), Positives = 54/92 (58%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
+RGH +E +PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK R
Sbjct: 138 SRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKRP 196
Query: 753 RRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
+ ST + G RAFRNIPGV+++
Sbjct: 197 VGPLVVM----RSTAVEG-KRAFRNIPGVDVM 223
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 120 bits (288), Expect = 7e-26
Identities = 62/116 (53%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = +2
Query: 167 PLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFL-CPRNSRQPYCVSKEAGHQT 343
PL SV SA P + + P +R + F +N RQ + V+ +AG Q
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTP-IRPDIVSFVHTNIAKNRRQAHAVNPQAGMQH 63
Query: 344 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLR 511
SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWHRRVN++
Sbjct: 64 SAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIK 119
Score = 79.4 bits (187), Expect = 1e-13
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
ARGH I ++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R
Sbjct: 140 ARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRG 199
Query: 753 RRRIQRKGPS*SSTRIRG-LTRAFRNIPGVELL 848
++ RKGP L +AFRN+PGVE++
Sbjct: 200 KKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVV 232
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 118 bits (285), Expect = 2e-25
Identities = 52/71 (73%), Positives = 59/71 (83%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N RQ Y VS +AGHQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P
Sbjct: 47 KNKRQAYGVSTKAGHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPN 106
Query: 473 KPWRRWHRRVN 505
K +RR+HR++N
Sbjct: 107 KTYRRFHRKIN 117
Score = 80.2 bits (189), Expect = 7e-14
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKM 746
ARGH I +PELPLV+++++Q INKT AV F + K + +K + S +R GKGKM
Sbjct: 140 ARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKM 199
Query: 747 RNRRRIQRKGPS*SSTRIRGLTRAFRNIPGVE 842
RNRRR+ GP G+ +A RNI GV+
Sbjct: 200 RNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVD 231
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 113 bits (273), Expect = 4e-24
Identities = 49/82 (59%), Positives = 59/82 (71%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N RQ Y VS AG TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT
Sbjct: 41 KNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPT 100
Query: 473 KPWRRWHRRVNLRTAESGLGSS 538
WR+WH ++N +S + S+
Sbjct: 101 TIWRKWHHKINKNQRKSAIFSA 122
Score = 56.8 bits (131), Expect = 7e-07
Identities = 30/93 (32%), Positives = 55/93 (59%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
+RG+ ++ IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRN
Sbjct: 134 SRGYRVKTIPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRNKLKRKLKSGKGKMRN 192
Query: 753 RRRIQRKGPS*SSTRIRGLTRAFRNIPGVELLK 851
RR + GP + ++ RNI ++ +K
Sbjct: 193 RRFKKPTGP---LLVFKNNLKSLRNIANIDCMK 222
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 111 bits (266), Expect = 3e-23
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 299 SRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 478
+RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK
Sbjct: 45 TRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKT 104
Query: 479 WRRWHRRV 502
RRW R+V
Sbjct: 105 HRRWARKV 112
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/108 (39%), Positives = 59/108 (54%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
+ARGH I + LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMR
Sbjct: 135 EARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMR 194
Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELLKC*QAEPTEAGSGKV 893
NRR QRKG + FRNI GV+ + + E G V
Sbjct: 195 NRRYTQRKGILIVHGESSEML-GFRNIRGVDQMSIDSLDLLELAPGGV 241
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 109 bits (262), Expect = 9e-23
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N RQP+ AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P
Sbjct: 46 KNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPL 105
Query: 473 KPWRRWHRRVNLRTAESGLGSSRCCYRRPS 562
K WRRWHR VN+ + S+ PS
Sbjct: 106 KVWRRWHRMVNVTQRRFAMCSAIAASSNPS 135
Score = 93.1 bits (221), Expect = 9e-18
Identities = 47/91 (51%), Positives = 61/91 (67%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
ARGH I+ +PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RN
Sbjct: 139 ARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARN 198
Query: 753 RRRIQRKGPS*SSTRIRGLTRAFRNIPGVEL 845
RR QR+G + GL AFRNI GV++
Sbjct: 199 RRYTQRRGVLIVHDQNEGLANAFRNISGVDI 229
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 106 bits (255), Expect = 7e-22
Identities = 52/91 (57%), Positives = 67/91 (73%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S+ +R+GKGKMRN
Sbjct: 142 ARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRN 201
Query: 753 RRRIQRKGPS*SSTRIRGLTRAFRNIPGVEL 845
RR +QR+GP + G+TRAFRNIPGVEL
Sbjct: 202 RRYVQRRGPLVVYSEDNGVTRAFRNIPGVEL 232
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 98.3 bits (234), Expect = 2e-19
Identities = 44/69 (63%), Positives = 54/69 (78%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N+RQP VS +AG Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P
Sbjct: 46 KNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPL 105
Query: 473 KPWRRWHRR 499
K +R+W R+
Sbjct: 106 KNFRKWQRK 114
Score = 86.2 bits (204), Expect = 1e-15
Identities = 46/93 (49%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
ARGH I +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR
Sbjct: 139 ARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMR 198
Query: 750 NRRRIQRKGP--S*SSTRIRGLTRAFRNIPGVE 842
R+ +RKGP + ++ + +AFRNIPGV+
Sbjct: 199 GRKIKERKGPLVVYGNDDLQAV-KAFRNIPGVD 230
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/92 (48%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 753 RRRIQRKGP-S*SSTRIRGLTRAFRNIPGVEL 845
RR I RKGP L +AFRNIPGVE+
Sbjct: 62 RRYISRKGPLIVYGMEGAKLVKAFRNIPGVEV 93
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 472
+N++QP+ AG + SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P
Sbjct: 43 KNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPP 102
Query: 473 KPWRRWHRRVNLRTAESGLGSS 538
RRW R V R + + S+
Sbjct: 103 TLLRRWFRPVPSRQRKFAIASA 124
Score = 82.2 bits (194), Expect = 2e-14
Identities = 38/93 (40%), Positives = 58/93 (62%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
QARGH++ ++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R
Sbjct: 135 QARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFR 194
Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
+KGP +G+ +AFRNIPGVE +
Sbjct: 195 RAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETI 227
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 79.8 bits (188), Expect = 9e-14
Identities = 32/65 (49%), Positives = 46/65 (70%)
Frame = +2
Query: 329 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNL 508
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+ + N
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 509 RTAES 523
+ S
Sbjct: 119 KVKVS 123
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 76.2 bits (179), Expect = 1e-12
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +3
Query: 627 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 776
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRG 147
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +2
Query: 293 RNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 406
+N QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 36 KNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/92 (42%), Positives = 55/92 (59%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
+ARGH I +P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMR
Sbjct: 128 EARGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMR 185
Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVEL 845
NRR I RKGP + R FRN+PGV+L
Sbjct: 186 NRRYITRKGPL-VIYNTEDVARGFRNLPGVDL 216
Score = 74.1 bits (174), Expect = 4e-12
Identities = 39/79 (49%), Positives = 46/79 (58%)
Frame = +2
Query: 302 RQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 481
R PY VS+ AG Q +A SWG GRAVAR+PR G G GA+ N RGG M PT
Sbjct: 45 RTPYAVSRYAGVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVI 98
Query: 482 RRWHRRVNLRTAESGLGSS 538
RRW R+VNL + S+
Sbjct: 99 RRWCRKVNLNQRRYAVASA 117
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/92 (34%), Positives = 57/92 (61%)
Frame = +3
Query: 576 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 755
RGH+I+ +P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R R
Sbjct: 134 RGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGR 193
Query: 756 RRIQRKGPS*SSTRIRGLTRAFRNIPGVELLK 851
R ++ K G+ RN PGV++++
Sbjct: 194 RYVKPKSVLIVVDEDEGIKLGARNHPGVDVVE 225
Score = 64.9 bits (151), Expect = 3e-09
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 296 NSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPT 472
N RQPY AG +TSAESWG G VA +PRV+G +G+ A GG + APT
Sbjct: 41 NRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT 100
Query: 473 KPWRRWHRRVNLRTAESGLGSSRCCYRRP 559
P + W +RVN + + L S+ +P
Sbjct: 101 -PEKDWTQRVNRKERRAALRSALAATAKP 128
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 73.7 bits (173), Expect = 6e-12
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
ARGH++EK+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR
Sbjct: 156 ARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRG 215
Query: 753 RRRIQRKGPS*SSTRIRG-LTRAFRNIPGVELL 848
RR + K + + L A RN PGV+++
Sbjct: 216 RRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVV 248
Score = 48.0 bits (109), Expect = 3e-04
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = +2
Query: 305 QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWR 484
QP V + AG + S ES+G G +ARIPR +G R G F RGGR P K +
Sbjct: 70 QPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEK 126
Query: 485 RWHRRVNLRTAESGLGSS 538
+ H +N + + + S+
Sbjct: 127 KLHEEINKKEKKLAIRSA 144
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/90 (41%), Positives = 55/90 (61%)
Frame = +3
Query: 576 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 755
RGH ++ +LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR R
Sbjct: 131 RGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGR 190
Query: 756 RRIQRKGPS*SSTRIRGLTRAFRNIPGVEL 845
R Q K R +AFR++PGV++
Sbjct: 191 RYKQPKSVL-IVARNSSAMKAFRSLPGVDI 219
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/94 (28%), Positives = 55/94 (58%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
+ RGH + ++ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK+R
Sbjct: 128 EQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLR 187
Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELLK 851
R+ KGP RG++ RN GV++++
Sbjct: 188 GRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVE 221
Score = 46.4 bits (105), Expect = 0.001
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +2
Query: 305 QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWR 484
QP+ AG +T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 45 QPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNT 99
Query: 485 RWHRRVN 505
+H ++N
Sbjct: 100 IYHEKIN 106
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/89 (32%), Positives = 54/89 (60%)
Frame = +3
Query: 576 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 755
R H+ E ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR R
Sbjct: 129 RSHVFEG--ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGR 186
Query: 756 RRIQRKGPS*SSTRIRGLTRAFRNIPGVE 842
R +++K + G+ +A +N+PGV+
Sbjct: 187 RYVKKKSVLLVVGKDDGVVKAAKNLPGVD 215
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/79 (32%), Positives = 37/79 (46%)
Frame = +2
Query: 302 RQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 481
RQPY + +G S E+WG G AR+PR + G + GGR P KP
Sbjct: 43 RQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPE 97
Query: 482 RRWHRRVNLRTAESGLGSS 538
R+W ++N + L S+
Sbjct: 98 RKWAEKINKKEMRKALKSA 116
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 618 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPS*SSTR 797
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGP
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 798 IRG-LTRAFRNIPGVELL 848
L +AFRN+PGVE++
Sbjct: 61 ENAKLLKAFRNVPGVEVV 78
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 59.3 bits (137), Expect = 1e-07
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAGKGK R
Sbjct: 142 KARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRR 197
Query: 750 NRRRIQRKGP-S*SSTRIRGLTRAFRNIPGVEL 845
R I+RKGP + L +A NIPG+++
Sbjct: 198 GRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDI 230
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 58.8 bits (136), Expect = 2e-07
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
+ARGH+ + P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR
Sbjct: 134 RARGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMR 193
Query: 750 NRRRIQRKGPS*SSTRIRG-LTRAFRNIPGVELL 848
R+ + GP + +A RN+ GV+++
Sbjct: 194 GRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVV 227
Score = 38.7 bits (86), Expect = 0.20
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 296 NSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 475
+S QP AG +TSAES+G +AR+PRV+ SG+ A GGR+ P
Sbjct: 48 HSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFPPS 102
Query: 476 PWRRWHRRVNLR 511
++ N++
Sbjct: 103 VNKKLAEEANVK 114
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 45.6 bits (103), Expect = 0.002
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 305 QPYCVSKEAGHQTSAESWG--TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 478
QP AG SA+S TG ARI R++GGG R G+ RGGR P K
Sbjct: 44 QPKGTHPTAGMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKV 103
Query: 479 WRRWHRRVNLRTAESGLGSS 538
+ H+++N + + L S+
Sbjct: 104 QKVIHKKINKKEKKLALCSA 123
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 44.0 bits (99), Expect = 0.005
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +2
Query: 305 QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 475
QP AG +TSA S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 57 QPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
Score = 39.5 bits (88), Expect = 0.11
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +3
Query: 576 RGHIIEKIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 752
RGH LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR
Sbjct: 142 RGHRFSA-ETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRG 200
Query: 753 RR-RIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
RR ++ + L A + +PGV+++
Sbjct: 201 RRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVV 233
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.022
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 573 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 704
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.1 bits (92), Expect = 0.038
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 403 WYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 507
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 41.1 bits (92), Expect = 0.038
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +3
Query: 648 TKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPS*SSTRIRGLTRAFRN 827
T++ V + L +D+ + + +RAGKG MR R+ K ++ GL +A RN
Sbjct: 207 TRKFVAMMEGLGLGADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARN 266
Query: 828 IPGVELL 848
IPGV+++
Sbjct: 267 IPGVDIV 273
Score = 34.3 bits (75), Expect = 4.3
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +2
Query: 326 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 505
+AG + S E WG GR V+RI R G T A RGGR K + W +++N
Sbjct: 90 QAGMKHSVEWWGKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKIN 144
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.35
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2
Query: 471 VGANIRPPRHMLPKAP*P 418
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.9
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 377 ARIPRVRGGGTHRSGQGAFGNMCRGG 454
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q0FPW5 Cluster: Tellurite resistance protein; n=1;
Roseovarius sp. HTCC2601|Rep: Tellurite resistance
protein - Roseovarius sp. HTCC2601
Length = 375
Score = 35.1 bits (77), Expect = 2.5
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = +2
Query: 194 RXPVQ-GCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQTSAESWG--- 361
R PV CS PP C ++ W+ + L R +R+ + ++ G +SAE G
Sbjct: 96 RLPVLVACSACPPQECGPLFHLSEWAADWGELARRTARE---IMRQYGRASSAEIAGRRP 152
Query: 362 --TGRAVARIPRVRGGGTH--RSGQG 427
RA ARI RGG H RSG+G
Sbjct: 153 FLAARAWARI-LARGGAPHELRSGRG 177
>UniRef50_UPI0000E205E8 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 143
Score = 34.7 bits (76), Expect = 3.3
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 466 PHEALAALAPSRQPPNSGERPWQQPLLLPASQRSFR 573
P ALAA SRQPP S ERP +P P + S R
Sbjct: 15 PRPALAAAPQSRQPPPSSERPRPRPARPPRGRHSPR 50
>UniRef50_UPI0000EBC636 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 275
Score = 34.3 bits (75), Expect = 4.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 463 RPHEALAALAPSRQPPNSGERPWQQPLLLPASQRSFRL 576
R H +AP+R P +SG RPW +P L + S R+
Sbjct: 196 REHARAVLIAPARTPRSSGRRPWARPRLQVRPRPSCRV 233
>UniRef50_A3C5V0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 327
Score = 33.9 bits (74), Expect = 5.7
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +2
Query: 359 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRR 499
G +VAR R RGGG G G +G +G A +PWRR RR
Sbjct: 241 GDEESVARASR-RGGGGGEEGHGGYGEEEQGE---AAARPWRRGRRR 283
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 347 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 457
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2ZSM5 Cluster: Putative uncharacterized protein; n=6;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 600
Score = 33.9 bits (74), Expect = 5.7
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +2
Query: 242 RRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVR-GGGTHRS 418
+R +R W ++ ++ R C + G + WG R R R GGG
Sbjct: 246 QRRLIRRWGGLWRWIRRRGGAAAACEEEVEGRRR-IRRWGLRWLARRSSRGRSGGGVRGG 304
Query: 419 GQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAESGLGSSRC 544
G+GA + GG A P HRR+ L + GSS C
Sbjct: 305 GRGAAADPAMGGA--ATAFPLALAHRRLFLLLLLAA-GSSSC 343
>UniRef50_P90580 Cluster: FCR3-varT11-1 protein; n=23; Plasmodium
falciparum|Rep: FCR3-varT11-1 protein - Plasmodium
falciparum
Length = 2647
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 496 SRQPPNSGERPWQQPLLLPASQRSFRLEDTLLKRFPSFPWL*LTKSRRST 645
++ PP+SG+ PW+ P ++PA S L ++ F +F + L K +ST
Sbjct: 2116 TKTPPSSGKNPWEHPAVIPALVTS-TLAWSVGIGFAAFTYFYLKKKTKST 2164
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 450 PRHMLPKAP*PDLWVPPPR 394
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_A0CGY6 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 962
Score = 33.5 bits (73), Expect = 7.5
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 625 TKSRRSTRPNRLSSS*GASRHGLISLRCTSLSVFVLVRVKCATVVVSSVRGPHNLQQGS 801
T ++RS P LS+S G L+ + + V +L + C + SSV LQQGS
Sbjct: 402 TSAKRSALPEYLSASFGLPTQQLLKQQASITEVQILYPLSCMAISKSSVYLAAGLQQGS 460
>UniRef50_A2ZKP9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 132
Score = 33.1 bits (72), Expect = 10.0
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +2
Query: 395 RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAESGLGSSR 541
R G R G G G C GG A + WRR RR T + G+G R
Sbjct: 61 REAGAVRVGGGTRGCQCDGGGAAAVSGKWRR-RRRGERATVQGGVGGGR 108
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 33.1 bits (72), Expect = 10.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 296 NSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 400
N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 41 NRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_Q96KW2 Cluster: POM121-like protein 2; n=4; Eutheria|Rep:
POM121-like protein 2 - Homo sapiens (Human)
Length = 971
Score = 33.1 bits (72), Expect = 10.0
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Frame = +2
Query: 344 SAESWGTGRAVARIPR---------VRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHR 496
S SWG+ ++ + P + GGT S + A G+ R F+ PW+R
Sbjct: 218 SLHSWGSDHSLTKRPNCSSMSSLASIYRGGTLSSKRNAIGSSYSSCRNFSD--PWKRSVP 275
Query: 497 RVNLRTAESGLGSSRCCYRRPSARSG*RTHY*KDSRASLGCS*QSPGDQQDQTGCHLPEA 676
V+ T E + + C+ RPS+ + + SLG S +S G QQ+Q LP +
Sbjct: 276 SVSFETPEWPIKKEKSCH-RPSSPVPLVSDF-----ESLGGS-ESSG-QQNQKIPQLPSS 327
Query: 677 PQGMV 691
P+ +V
Sbjct: 328 PENLV 332
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 865,516,652
Number of Sequences: 1657284
Number of extensions: 17369589
Number of successful extensions: 48830
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 46229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48761
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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