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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C17
         (904 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   146   4e-35
BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p pro...   146   4e-35
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   146   4e-35
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   146   4e-35
X06881-1|CAA29998.1|  123|Drosophila melanogaster protein ( Dros...   128   1e-29
AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p pro...    31   2.9  
AE014296-2188|AAF49882.2|  271|Drosophila melanogaster CG17666-P...    31   2.9  
AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-P...    31   2.9  
AY071142-1|AAL48764.1|  572|Drosophila melanogaster RE17942p pro...    29   8.7  
AF223064-1|AAF34687.1|  571|Drosophila melanogaster putative mic...    29   8.7  
AE014297-195|AAF52059.2|  572|Drosophila melanogaster CG10229-PA...    29   8.7  

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  146 bits (354), Expect = 4e-35
 Identities = 75/126 (59%), Positives = 86/126 (68%)
 Frame = +2

Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340
           ARPL SV +    P +  +   P +  + P           L  RN+RQ Y VS+ AGHQ
Sbjct: 6   ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64

Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520
           TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+    
Sbjct: 65  TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124

Query: 521 SGLGSS 538
             L S+
Sbjct: 125 YALVSA 130



 Score =  128 bits (308), Expect = 1e-29
 Identities = 58/93 (62%), Positives = 75/93 (80%)
 Frame = +3

Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
           Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200

Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
           +RRRI R+GP     +  GL +AFRNIPG+E +
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233


>BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p
           protein.
          Length = 233

 Score =  146 bits (354), Expect = 4e-35
 Identities = 75/126 (59%), Positives = 86/126 (68%)
 Frame = +2

Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340
           ARPL SV +    P +  +   P +  + P           L  RN+RQ Y VS+ AGHQ
Sbjct: 6   ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64

Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520
           TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+    
Sbjct: 65  TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124

Query: 521 SGLGSS 538
             L S+
Sbjct: 125 YALVSA 130



 Score =  122 bits (293), Expect = 9e-28
 Identities = 56/88 (63%), Positives = 71/88 (80%)
 Frame = +3

Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
           Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200

Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIP 833
           +RRRI R+GP     +  GL +AFRNIP
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIP 228


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  146 bits (354), Expect = 4e-35
 Identities = 75/126 (59%), Positives = 86/126 (68%)
 Frame = +2

Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340
           ARPL SV +    P +  +   P +  + P           L  RN+RQ Y VS+ AGHQ
Sbjct: 6   ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64

Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520
           TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+    
Sbjct: 65  TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124

Query: 521 SGLGSS 538
             L S+
Sbjct: 125 YALVSA 130



 Score =  128 bits (308), Expect = 1e-29
 Identities = 58/93 (62%), Positives = 75/93 (80%)
 Frame = +3

Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
           Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200

Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
           +RRRI R+GP     +  GL +AFRNIPG+E +
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  146 bits (354), Expect = 4e-35
 Identities = 75/126 (59%), Positives = 86/126 (68%)
 Frame = +2

Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340
           ARPL SV +    P +  +   P +  + P           L  RN+RQ Y VS+ AGHQ
Sbjct: 6   ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64

Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520
           TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+    
Sbjct: 65  TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124

Query: 521 SGLGSS 538
             L S+
Sbjct: 125 YALVSA 130



 Score =  128 bits (308), Expect = 1e-29
 Identities = 58/93 (62%), Positives = 75/93 (80%)
 Frame = +3

Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
           Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200

Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
           +RRRI R+GP     +  GL +AFRNIPG+E +
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233


>X06881-1|CAA29998.1|  123|Drosophila melanogaster protein (
           Drosophila gene forribosomal protein L1 fragment. ).
          Length = 123

 Score =  128 bits (309), Expect = 1e-29
 Identities = 57/68 (83%), Positives = 60/68 (88%)
 Frame = +2

Query: 335 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRT 514
           HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHRRVN+  
Sbjct: 1   HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60

Query: 515 AESGLGSS 538
               L S+
Sbjct: 61  RRYALVSA 68



 Score = 68.9 bits (161), Expect = 9e-12
 Identities = 29/45 (64%), Positives = 39/45 (86%)
 Frame = +3

Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 704
           Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 79  QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123


>AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p
           protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 367 TCCRPNSS-CPWWWYP*VRSGC 429
           TCC P S+ CPW WY    +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739


>AE014296-2188|AAF49882.2|  271|Drosophila melanogaster CG17666-PB,
           isoform B protein.
          Length = 271

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 367 TCCRPNSS-CPWWWYP*VRSGC 429
           TCC P S+ CPW WY    +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138


>AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-PA,
           isoform A protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 367 TCCRPNSS-CPWWWYP*VRSGC 429
           TCC P S+ CPW WY    +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739


>AY071142-1|AAL48764.1|  572|Drosophila melanogaster RE17942p
           protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 426 P*PDLWVPPPRTRGIRATARPVPHDSAL 343
           P PD+W PPP+   +    +P P   A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160


>AF223064-1|AAF34687.1|  571|Drosophila melanogaster putative
           microtubule severingprotein katanin p60 subunit protein.
          Length = 571

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 426 P*PDLWVPPPRTRGIRATARPVPHDSAL 343
           P PD+W PPP+   +    +P P   A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160


>AE014297-195|AAF52059.2|  572|Drosophila melanogaster CG10229-PA
           protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 426 P*PDLWVPPPRTRGIRATARPVPHDSAL 343
           P PD+W PPP+   +    +P P   A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,839,472
Number of Sequences: 53049
Number of extensions: 843849
Number of successful extensions: 2469
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2456
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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