Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_C17
(904 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 146 4e-35
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 146 4e-35
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 146 4e-35
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 146 4e-35
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 128 1e-29
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.9
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.9
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.9
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 29 8.7
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 29 8.7
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 29 8.7
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 146 bits (354), Expect = 4e-35
Identities = 75/126 (59%), Positives = 86/126 (68%)
Frame = +2
Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340
ARPL SV + P + + P + + P L RN+RQ Y VS+ AGHQ
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64
Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 521 SGLGSS 538
L S+
Sbjct: 125 YALVSA 130
Score = 128 bits (308), Expect = 1e-29
Identities = 58/93 (62%), Positives = 75/93 (80%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
+RRRI R+GP + GL +AFRNIPG+E +
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 146 bits (354), Expect = 4e-35
Identities = 75/126 (59%), Positives = 86/126 (68%)
Frame = +2
Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340
ARPL SV + P + + P + + P L RN+RQ Y VS+ AGHQ
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64
Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 521 SGLGSS 538
L S+
Sbjct: 125 YALVSA 130
Score = 122 bits (293), Expect = 9e-28
Identities = 56/88 (63%), Positives = 71/88 (80%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIP 833
+RRRI R+GP + GL +AFRNIP
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIP 228
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 146 bits (354), Expect = 4e-35
Identities = 75/126 (59%), Positives = 86/126 (68%)
Frame = +2
Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340
ARPL SV + P + + P + + P L RN+RQ Y VS+ AGHQ
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64
Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 521 SGLGSS 538
L S+
Sbjct: 125 YALVSA 130
Score = 128 bits (308), Expect = 1e-29
Identities = 58/93 (62%), Positives = 75/93 (80%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
+RRRI R+GP + GL +AFRNIPG+E +
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 146 bits (354), Expect = 4e-35
Identities = 75/126 (59%), Positives = 86/126 (68%)
Frame = +2
Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340
ARPL SV + P + + P + + P L RN+RQ Y VS+ AGHQ
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64
Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 521 SGLGSS 538
L S+
Sbjct: 125 YALVSA 130
Score = 128 bits (308), Expect = 1e-29
Identities = 58/93 (62%), Positives = 75/93 (80%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200
Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848
+RRRI R+GP + GL +AFRNIPG+E +
Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 128 bits (309), Expect = 1e-29
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = +2
Query: 335 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRT 514
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHRRVN+
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 515 AESGLGSS 538
L S+
Sbjct: 61 RRYALVSA 68
Score = 68.9 bits (161), Expect = 9e-12
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3
Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 704
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 79 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 367 TCCRPNSS-CPWWWYP*VRSGC 429
TCC P S+ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 367 TCCRPNSS-CPWWWYP*VRSGC 429
TCC P S+ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 367 TCCRPNSS-CPWWWYP*VRSGC 429
TCC P S+ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 29.1 bits (62), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 426 P*PDLWVPPPRTRGIRATARPVPHDSAL 343
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 29.1 bits (62), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 426 P*PDLWVPPPRTRGIRATARPVPHDSAL 343
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 29.1 bits (62), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 426 P*PDLWVPPPRTRGIRATARPVPHDSAL 343
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,839,472
Number of Sequences: 53049
Number of extensions: 843849
Number of successful extensions: 2469
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2456
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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