BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP04_F_C17 (904 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 146 4e-35 BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 146 4e-35 AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 146 4e-35 AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 146 4e-35 X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 128 1e-29 AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.9 AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.9 AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.9 AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 29 8.7 AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 29 8.7 AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 29 8.7 >X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Drosophila melanogastermRNA for put. ribosomal protein L1. ). Length = 407 Score = 146 bits (354), Expect = 4e-35 Identities = 75/126 (59%), Positives = 86/126 (68%) Frame = +2 Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340 ARPL SV + P + + P + + P L RN+RQ Y VS+ AGHQ Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64 Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+ Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124 Query: 521 SGLGSS 538 L S+ Sbjct: 125 YALVSA 130 Score = 128 bits (308), Expect = 1e-29 Identities = 58/93 (62%), Positives = 75/93 (80%) Frame = +3 Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749 Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200 Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848 +RRRI R+GP + GL +AFRNIPG+E + Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233 >BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p protein. Length = 233 Score = 146 bits (354), Expect = 4e-35 Identities = 75/126 (59%), Positives = 86/126 (68%) Frame = +2 Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340 ARPL SV + P + + P + + P L RN+RQ Y VS+ AGHQ Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64 Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+ Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124 Query: 521 SGLGSS 538 L S+ Sbjct: 125 YALVSA 130 Score = 122 bits (293), Expect = 9e-28 Identities = 56/88 (63%), Positives = 71/88 (80%) Frame = +3 Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749 Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200 Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIP 833 +RRRI R+GP + GL +AFRNIP Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIP 228 >AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p protein. Length = 401 Score = 146 bits (354), Expect = 4e-35 Identities = 75/126 (59%), Positives = 86/126 (68%) Frame = +2 Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340 ARPL SV + P + + P + + P L RN+RQ Y VS+ AGHQ Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64 Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+ Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124 Query: 521 SGLGSS 538 L S+ Sbjct: 125 YALVSA 130 Score = 128 bits (308), Expect = 1e-29 Identities = 58/93 (62%), Positives = 75/93 (80%) Frame = +3 Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749 Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200 Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848 +RRRI R+GP + GL +AFRNIPG+E + Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233 >AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA protein. Length = 401 Score = 146 bits (354), Expect = 4e-35 Identities = 75/126 (59%), Positives = 86/126 (68%) Frame = +2 Query: 161 ARPLXSVXSAXRXPVQGCSQAPPXSCSRRPYVRTWSMMFTFLCPRNSRQPYCVSKEAGHQ 340 ARPL SV + P + + P + + P L RN+RQ Y VS+ AGHQ Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLP-AVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQ 64 Query: 341 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRTAE 520 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN+ Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124 Query: 521 SGLGSS 538 L S+ Sbjct: 125 YALVSA 130 Score = 128 bits (308), Expect = 1e-29 Identities = 58/93 (62%), Positives = 75/93 (80%) Frame = +3 Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 749 Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMR 200 Query: 750 NRRRIQRKGPS*SSTRIRGLTRAFRNIPGVELL 848 +RRRI R+GP + GL +AFRNIPG+E + Sbjct: 201 DRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233 >X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Drosophila gene forribosomal protein L1 fragment. ). Length = 123 Score = 128 bits (309), Expect = 1e-29 Identities = 57/68 (83%), Positives = 60/68 (88%) Frame = +2 Query: 335 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRT 514 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHRRVN+ Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60 Query: 515 AESGLGSS 538 L S+ Sbjct: 61 RRYALVSA 68 Score = 68.9 bits (161), Expect = 9e-12 Identities = 29/45 (64%), Positives = 39/45 (86%) Frame = +3 Query: 570 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 704 Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K Sbjct: 79 QSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123 >AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p protein. Length = 872 Score = 30.7 bits (66), Expect = 2.9 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = +1 Query: 367 TCCRPNSS-CPWWWYP*VRSGC 429 TCC P S+ CPW WY +GC Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739 >AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB, isoform B protein. Length = 271 Score = 30.7 bits (66), Expect = 2.9 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = +1 Query: 367 TCCRPNSS-CPWWWYP*VRSGC 429 TCC P S+ CPW WY +GC Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138 >AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA, isoform A protein. Length = 872 Score = 30.7 bits (66), Expect = 2.9 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = +1 Query: 367 TCCRPNSS-CPWWWYP*VRSGC 429 TCC P S+ CPW WY +GC Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739 >AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p protein. Length = 572 Score = 29.1 bits (62), Expect = 8.7 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -2 Query: 426 P*PDLWVPPPRTRGIRATARPVPHDSAL 343 P PD+W PPP+ + +P P A+ Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160 >AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative microtubule severingprotein katanin p60 subunit protein. Length = 571 Score = 29.1 bits (62), Expect = 8.7 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -2 Query: 426 P*PDLWVPPPRTRGIRATARPVPHDSAL 343 P PD+W PPP+ + +P P A+ Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160 >AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA protein. Length = 572 Score = 29.1 bits (62), Expect = 8.7 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -2 Query: 426 P*PDLWVPPPRTRGIRATARPVPHDSAL 343 P PD+W PPP+ + +P P A+ Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 39,839,472 Number of Sequences: 53049 Number of extensions: 843849 Number of successful extensions: 2469 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2290 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2456 length of database: 24,988,368 effective HSP length: 85 effective length of database: 20,479,203 effective search space used: 4403028645 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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