Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C16
         (914 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.36 

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 26.2 bits (55), Expect = 0.36
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +2

Query: 461 LKFGVLLWC---LTYVGACFNGITLIILGWIALFTLXKAYXMNXXQVDAXLELXRAKIXX 631
           L F +LLW    L ++  C N     +  WI L+TL K   +   Q  A + + + K   
Sbjct: 138 LFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCAFVVVLKQKFCV 197

Query: 632 ITXKVR 649
           +   ++
Sbjct: 198 VNQYIK 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,922
Number of Sequences: 336
Number of extensions: 920
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25547951
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)