Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_C16
(914 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0144 - 25973635-25973801,25973878-25973947,25974049-259741... 41 0.001
01_01_0885 + 6966700-6966979,6967930-6968110,6968224-6968365,696... 40 0.003
03_02_0927 - 12452262-12452428,12452538-12452607,12452689-124528... 39 0.006
06_03_0181 + 17618888-17619125,17621503-17621683,17621765-176219... 38 0.011
01_06_0631 + 30732091-30732292,30732690-30732870,30732994-307331... 35 0.10
05_07_0022 - 27103367-27103533,27103783-27103852,27104074-271042... 31 1.7
03_06_0184 - 32188778-32188947,32189104-32189173,32189332-321894... 30 2.2
03_01_0347 - 2730242-2730425,2730541-2730692,2730782-2730940,273... 29 5.2
04_04_1534 + 34200538-34200589,34200677-34200857,34201701-342018... 29 6.8
04_01_0480 + 6279576-6279755,6279863-6279988,6280074-6280151,628... 28 9.0
>05_06_0144 -
25973635-25973801,25973878-25973947,25974049-25974190,
25974647-25974827,25975248-25975443
Length = 251
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = +2
Query: 344 EVSVSAERAQALAXXXTAHLNAXLYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGIT 523
EV + + A +A +N LR + DL L V LW L+ +G+C N +T
Sbjct: 133 EVKIPEDLAVNVARSLRFEINRGFATLREIGQGHDLKKFLIVVVGLWVLSVLGSCCNFLT 192
Query: 524 LIILGWIALFTLXKAYXMNXXQVDA 598
L + ++ L+T+ Y Q+DA
Sbjct: 193 LFYIVFMVLYTVPVLYEKYEDQIDA 217
>01_01_0885 +
6966700-6966979,6967930-6968110,6968224-6968365,
6968448-6968517,6968617-6968783
Length = 279
Score = 39.9 bits (89), Expect = 0.003
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +2
Query: 344 EVSVSAERAQALAXXXTAHLNAXLYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGIT 523
EV + + +A +N LR++ L D+ L LW L+ +G+C N +T
Sbjct: 161 EVIIPEDLVVNIALSTRYEINRAFANLRQIALGRDIKKFLIVIAGLWLLSVLGSCCNFLT 220
Query: 524 LIILGWIALFTLXKAYXMNXXQVDAXLELXRAKI----XXITXKVRAXVPXG 667
L+ + ++ L T+ Y Q+D+ E +I + KV + VP G
Sbjct: 221 LVYIVFVVLHTVPILYEKYEDQIDSYGEKGWVEIKKQYAVLDAKVLSKVPRG 272
>03_02_0927 -
12452262-12452428,12452538-12452607,12452689-12452830,
12452937-12453117,12454068-12454203
Length = 231
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/84 (30%), Positives = 37/84 (44%)
Frame = +2
Query: 344 EVSVSAERAQALAXXXTAHLNAXLYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGIT 523
E+ +S E A +N L + L +D + +LLW L+ +G + IT
Sbjct: 113 ELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDFRLFFQVVLLLWLLSVIGNFCSSIT 172
Query: 524 LIILGWIALFTLXKAYXMNXXQVD 595
L G IAL T+ Y N QVD
Sbjct: 173 LAYFGTIALVTIPALYSKNQEQVD 196
>06_03_0181 +
17618888-17619125,17621503-17621683,17621765-17621906,
17622002-17622071,17622162-17622307,17623382-17623948,
17624558-17624641,17624723-17624797,17625049-17625217,
17625395-17625586,17625662-17626053
Length = 751
Score = 37.9 bits (84), Expect = 0.011
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +2
Query: 347 VSVSAERAQALAXXXTAHLNAXLYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITL 526
V + + A ++ + +N L+ R + L DL L V LW L+ VG+C + +TL
Sbjct: 148 VQIPEDVAVNVSRALRSDINRALHLFREIALGHDLKKFLGVIVALWVLSEVGSCCDFLTL 207
Query: 527 IILGWIALFTLXKAYXMNXXQVD 595
I + + L T+ Y +VD
Sbjct: 208 IYVAVLMLHTVPILYDKYQDKVD 230
>01_06_0631 +
30732091-30732292,30732690-30732870,30732994-30733135,
30733228-30733297,30733383-30733549
Length = 253
Score = 34.7 bits (76), Expect = 0.10
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = +2
Query: 344 EVSVSAERAQALAXXXTAHLNAXLYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGIT 523
EV + + +A +N LR + DL L LW L+ +G+ N +T
Sbjct: 135 EVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIAGLWILSVLGSSCNFLT 194
Query: 524 LIILGWIALFTLXKAYXMNXXQVDA 598
L + ++AL+T+ Y +VDA
Sbjct: 195 LFYIVFVALYTVPVLYEKYEDKVDA 219
>05_07_0022 -
27103367-27103533,27103783-27103852,27104074-27104215,
27104372-27104552,27104654-27104756
Length = 220
Score = 30.7 bits (66), Expect = 1.7
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 338 EAEVSVSAERAQALAXXX-TAHLNAXLYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFN 514
E VS A R AL AH +A LY++ ++L L LW L +G +
Sbjct: 102 EVIVSEHAFRELALTLHSKVAHFSAVLYDIS---CGKELRKFLAVIGSLWILAVIGETCS 158
Query: 515 GITLIILGWIALFTLXKAYXMNXXQVD 595
TL+ +G++ TL Y +VD
Sbjct: 159 FTTLLYVGFLCALTLPALYERYETEVD 185
>03_06_0184 -
32188778-32188947,32189104-32189173,32189332-32189473,
32189559-32189739,32189857-32190051,32190782-32190795,
32190815-32190864,32191493-32191519
Length = 282
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 479 LWCLTYVGACFNGITLIILGWIALFTLXKAYXMNXXQVDAXL 604
LW +G N +T+I +G+++ TL Y QVD L
Sbjct: 208 LWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFL 249
>03_01_0347 -
2730242-2730425,2730541-2730692,2730782-2730940,
2734144-2734618,2734713-2734775,2734870-2735078
Length = 413
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 467 FGVLLWCLTYVGACFNGITLIILGW 541
FG+ WC+ Y G NG T+ W
Sbjct: 292 FGLKFWCIVYSGFACNGFTVFAQLW 316
>04_04_1534 +
34200538-34200589,34200677-34200857,34201701-34201842,
34201963-34202032,34202169-34202302
Length = 192
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 320 PFKXLLEAEVS-VSAERAQALAXXXTAHLNAXLYELRRLFLVEDLVDSLKFGVLLWCLTY 496
P L + EVS V E+A A +N L + + D +K ++LW ++Y
Sbjct: 79 PLPPLPKLEVSDVVVEKA---ADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSY 135
Query: 497 VGACFNGITLIIL 535
+G FN +TLI +
Sbjct: 136 IGMLFNFLTLIYI 148
>04_01_0480 +
6279576-6279755,6279863-6279988,6280074-6280151,
6280847-6280972,6281244-6281345,6281416-6281490,
6281852-6281975,6283005-6283107,6283546-6283617,
6283662-6283788,6284125-6284180,6284438-6284453
Length = 394
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 439 GGGPGGLAEVRRAAVVPHVRGGVLQRDHAHHPRLDS 546
GG GG A+ R + HV G V Q HHP+L S
Sbjct: 292 GGSAGGGADGSRYWLAIHVVGVVRQTFTNHHPKLCS 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,275,003
Number of Sequences: 37544
Number of extensions: 120691
Number of successful extensions: 547
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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