Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C13
         (863 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9RYI0 Cluster: Protein kinase, putative; n=1; Deinococ...    37   0.76 
UniRef50_A4JFL2 Cluster: Putative uncharacterized protein; n=1; ...    35   3.1  
UniRef50_Q800D4 Cluster: Spindle checkpoint protein BubR1; n=5; ...    34   5.3  
UniRef50_O15054 Cluster: JmjC domain-containing protein 3; n=13;...    33   7.1  

>UniRef50_Q9RYI0 Cluster: Protein kinase, putative; n=1; Deinococcus
           radiodurans|Rep: Protein kinase, putative - Deinococcus
           radiodurans
          Length = 524

 Score = 36.7 bits (81), Expect = 0.76
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 554 EMDAEIQKKVAEFKEKIAKAQLEREQQSHQRPEPFMLPLPAPTXHAADATG-TNPRXPGQ 730
           + D E++K++ E ++++ K    + ++    P P  +P PAP   A   T    PR P  
Sbjct: 353 QTDREVEKRLRELEKEVRKEARRQSRRPAPAPAPIPIPAPAPQRPAPPPTPFPGPRRPAA 412

Query: 731 P 733
           P
Sbjct: 413 P 413


>UniRef50_A4JFL2 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia vietnamiensis G4|Rep: Putative
           uncharacterized protein - Burkholderia vietnamiensis
           (strain G4 / LMG 22486) (Burkholderiacepacia (strain
           R1808))
          Length = 316

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
 Frame = +2

Query: 563 AEIQKKVAEFKEKIAKAQLEREQQSHQRPEPFM-----LPLPAPTXHAADATGTNPRXPG 727
           AE  ++ AE  E I  A+ ER++Q+     P +      P+PAPT  +A A+G +    G
Sbjct: 120 AEFDREFAECSELIRAAEAERKEQARWTNAPALPRVENKPMPAPTAASAAASGVSAVFGG 179

Query: 728 QP 733
            P
Sbjct: 180 AP 181


>UniRef50_Q800D4 Cluster: Spindle checkpoint protein BubR1; n=5;
           Gallus gallus|Rep: Spindle checkpoint protein BubR1 -
           Gallus gallus (Chicken)
          Length = 1085

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +2

Query: 566 EIQKKVAEFKEKIAKAQLEREQQSHQRPEPFMLPLP 673
           EIQKK+ E ++K+ + +  ++QQ H++P     P P
Sbjct: 424 EIQKKIEELEKKLKEKENHKQQQLHEQPTEVTKPSP 459


>UniRef50_O15054 Cluster: JmjC domain-containing protein 3; n=13;
           Eutheria|Rep: JmjC domain-containing protein 3 - Homo
           sapiens (Human)
          Length = 1679

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
 Frame = +2

Query: 596 EKIAKAQLEREQQSHQRPEPFMLPLPAPTXH-------AADATGTNPRXPG 727
           E+   A  ER++Q H  P P+  P PA T H        A   G  PR PG
Sbjct: 290 ERKGSAPPERQEQRHSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRPPG 340


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,301,329
Number of Sequences: 1657284
Number of extensions: 7908439
Number of successful extensions: 25775
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25563
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)