Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C13
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232...    31   1.2  
06_03_1303 + 29180837-29181205,29181289-29181306,29181337-291816...    29   3.6  
02_04_0138 - 20144653-20144685,20144992-20145081,20145405-201454...    29   3.6  
10_08_0589 + 19022233-19022457,19022578-19022709,19023129-190232...    29   4.8  
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510...    29   4.8  
03_02_0332 + 7559469-7560892,7563193-7563298,7563403-7563491,756...    28   8.4  

>10_08_0495 -
           18318028-18320399,18322450-18322981,18323097-18323200,
           18323653-18323701,18323979-18324119,18324889-18324957,
           18325048-18325137,18325301-18326251,18326831-18327502
          Length = 1659

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 554 EMDAEIQKKVAEFKEKIAKAQLEREQQSHQRPEPFMLPLPAPTXHAADATGTNPRXPG 727
           EM  ++QKK+A F    + +Q   ++ +   P+      P P+ HA  A G     PG
Sbjct: 715 EMIEDVQKKLAGFSFSSSSSQASMQRNTSVPPDQNSPSPPPPSSHAPHAQGPYGVPPG 772


>06_03_1303 +
           29180837-29181205,29181289-29181306,29181337-29181622,
           29185008-29186284,29186499-29187005
          Length = 818

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 563 AEIQKKVAEFKE--KIAKAQLEREQQSHQRPEPFMLPLPAPTXHAADATGT 709
           A++++KV    E  K  + + ERE++  + P P   P P+P+  A+  T T
Sbjct: 499 AQLEEKVRRLSEYDKRMERERERERKRVRAPSPSPSPSPSPSPSASATTPT 549


>02_04_0138 -
           20144653-20144685,20144992-20145081,20145405-20145489,
           20146859-20146922,20149388-20149628
          Length = 170

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -2

Query: 229 WKKKQTRKMRXCGSTGGRTACEAARGGTTAXPXDCRKARKAXRVEGGGSRWKEAGE 62
           W++++    R CG  GG  A EA R          R+ R+  R  GG +   E G+
Sbjct: 27  WRRRRGGGRRSCGGGGGAAAVEAERQSRYCGGG--RQRRRRHRGSGGDAVEAEGGD 80


>10_08_0589 +
           19022233-19022457,19022578-19022709,19023129-19023227,
           19023384-19023431,19023926-19023976,19024205-19024273,
           19024337-19024419,19024643-19024766,19024843-19024902,
           19024983-19025225,19025426-19025509,19025581-19025728,
           19025909-19025986,19025987-19026114,19026204-19026251,
           19026922-19027052,19027708-19027817,19028365-19028468,
           19028614-19028684,19029091-19029389,19029507-19029682
          Length = 836

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +2

Query: 569 IQKKVAEFKEK-IAKAQLEREQQ-SHQRPEPFMLPLPAPTXHAADATGTN 712
           I+KK  +F+E  IAK  LE E+   + +PE    P P  T     A  TN
Sbjct: 721 IRKKFQQFRESAIAKRVLEEEKAVQNDKPERLKDPEPTSTPAVKKAQNTN 770


>07_01_0678 -
           5103836-5104613,5104697-5104888,5104994-5105036,
           5105712-5105835,5105924-5106016,5106754-5106931,
           5107032-5107138,5108098-5108179,5108277-5108314,
           5108409-5108495,5109025-5109135,5109282-5109773
          Length = 774

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +2

Query: 572 QKKVAEFKEKIAKAQLEREQQSHQRPEPFMLPLPAP-TXHAADATGTNPRXPGQP 733
           Q+  AE +E+  K Q   E++    P P   P PAP       A  + P+ P  P
Sbjct: 51  QEAAAEGEEEEEKKQQREEEEEAPAPAPAPAPEPAPRKARLPRACNSKPKPPPPP 105


>03_02_0332 +
           7559469-7560892,7563193-7563298,7563403-7563491,
           7563780-7563841,7564247-7564278
          Length = 570

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 349 QRAAGAAPLAVPDFALQELQEARHQENA 432
           Q AA  AP+A+P  AL E +E + ++++
Sbjct: 297 QLAAATAPVAIPGVALAETEELKEEQSS 324


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,701,420
Number of Sequences: 37544
Number of extensions: 260566
Number of successful extensions: 910
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)