Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C13
         (863 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          27   0.74 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   3.0  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   3.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   5.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.1  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 27.1 bits (57), Expect = 0.74
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 575 KKVAEFKEKIAKAQLEREQQSHQRPEPFMLPLPAPTXHAAD 697
           K  AE  E+  +A  ++ Q+  ++  P   P PAPT    D
Sbjct: 288 KPNAELLEEAVEALKKKYQEQRKKDRPEAAPAPAPTVITVD 328


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 572 QKKVAEFKEKIAKAQLEREQQSHQRPEPFMLPLPAPTXHAADATGTNPRXPGQP 733
           +K+ A+ +E+  +AQ+E+   +HQR    +  L A        +  +PR P  P
Sbjct: 155 EKEEAKRREEKLEAQMEKLAAAHQRDRDVLNSLLAAKVGGGQPS-ASPRQPPTP 207


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = +2

Query: 572 QKKVAEFKEKIAKAQLEREQQSHQRPEPFMLPLPAPTXHAADATGTNPRXP 724
           +K+ A+ +E+  KAQ+E+   +HQR    +  L A        + ++ + P
Sbjct: 131 EKEEAKRREEKLKAQMEKLAAAHQRDRNLLNSLLAAKVAGGQPSASSRQPP 181


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 566 EIQKKVAEFKEKIAKAQLEREQ 631
           +IQK + E K KI + ++ER+Q
Sbjct: 310 QIQKYLCEQKRKIGEFEVERDQ 331


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
 Frame = -2

Query: 193 GSTGGRTACEAA--RGGTTAXPXDCRKARKAXRVEGGG 86
           G   GR  C     R G T    DCR + +     GGG
Sbjct: 605 GPDHGRCVCGQCECREGWTGPACDCRASNETCMPPGGG 642


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,922
Number of Sequences: 2352
Number of extensions: 7829
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)