Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_C10
(872 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 167 2e-40
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 75 2e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 74 5e-12
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 58 4e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 50 8e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 44 0.004
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.047
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 40 0.11
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.1
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.4
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.4
UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a ... 33 7.2
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 33 7.2
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 167 bits (407), Expect = 2e-40
Identities = 76/80 (95%), Positives = 76/80 (95%)
Frame = +2
Query: 503 PWTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLI 682
P TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP RLPDTCPPFSLREAWRFLI
Sbjct: 22 PLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 81
Query: 683 AHAVXISVRCXSFAPSWAVC 742
AHAV ISVRC SFAPSWAVC
Sbjct: 82 AHAVGISVRCRSFAPSWAVC 101
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 75.4 bits (177), Expect = 2e-12
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2
Query: 503 PWTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 622
P TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 58 PLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 73.7 bits (173), Expect = 5e-12
Identities = 34/44 (77%), Positives = 35/44 (79%)
Frame = +2
Query: 503 PWTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPXRLP 634
P TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 90 PLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 58.8 bits (136), Expect = 2e-07
Identities = 40/78 (51%), Positives = 44/78 (56%)
Frame = +1
Query: 274 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 453
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76
Query: 454 GTVKRPRCWRFSIGSAPL 507
RPR RFSIGSAPL
Sbjct: 77 ---IRPRRSRFSIGSAPL 91
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +1
Query: 601 VRSPVPTLXLTGYLSAFLPSGSVALSHSSRCXYLSSV 711
+RSPVPTL LTGYLSAFLPSGSVALSHSSRC YLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 450 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 337
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 250 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 417
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 760 AEXGXWAHSPAWSEXXTPN*DTYSVSYEKAPRFPKGER 647
AE G A+SPAWSE P+ DT SVSYEKAPRFPKG++
Sbjct: 24 AERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKK 61
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -3
Query: 654 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 535
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.0 bits (114), Expect = 8e-05
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +2
Query: 473 VAGVFP*APPPWTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 622
++ +FP PP T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 53 DPDMIRYIDEFGQTTTRMQ 109
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/68 (41%), Positives = 30/68 (44%)
Frame = +2
Query: 536 VRGGETRQDYKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIAHAVXISVRCX 715
VR GETRQD K P P PPFSL + + IS RC
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 716 SFAPSWAV 739
SFAPSWAV
Sbjct: 83 SFAPSWAV 90
Score = 33.1 bits (72), Expect = 9.5
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3
Query: 564 IKIPGVSPWKLPRALSCSDPXAYRIPVRLSPFGKRGA 674
+KI VS LP ALSCS+P RIPV PF G+
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGS 66
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 369 HSKAVIRLSTESGDNAGKNM 428
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.047
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 248 SALMNRPTRGERRFAYW 298
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 320 ERGSGRAPNTQTASPRALADSLMQ 249
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 744 QXPXSADRCALSGNYRLESXR*XRXIA-LAXAXGXRIXXTRXV 869
+ P DRCALSGNYRLES ++ LA A G RI R V
Sbjct: 3 EPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYV 45
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.1
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 681 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 577
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.4
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 459 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 337
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 131 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 298
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a
DNA-binding HTH domain and an aminotransferase domain
(MocR family) and their eukaryotic orthologs; n=1;
Hahella chejuensis KCTC 2396|Rep: Transcriptional
regulator containing a DNA-binding HTH domain and an
aminotransferase domain (MocR family) and their
eukaryotic orthologs - Hahella chejuensis (strain KCTC
2396)
Length = 498
Score = 33.5 bits (73), Expect = 7.2
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -3
Query: 681 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQG 502
MRKR+A R++ R+G EG + G LV S PL+ S F+ VQ
Sbjct: 395 MRKRYAMRQQTLATALQPREGDVEILVEGDNAGLHLV---CWMPSLPLSAVSTFIEQVQT 451
Query: 501 GGAYGKTPATRPFY-GSWPFAGLLL 430
G + PFY G P AGLLL
Sbjct: 452 QGV--RVYPIHPFYHGEPPAAGLLL 474
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.5 bits (73), Expect = 7.2
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2
Query: 211 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQIN 44
+MNA V + FIAA + +T + AFF L S G ++VSY VW ++
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDLH 77
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 33.5 bits (73), Expect = 7.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2
Query: 760 AEXGXWAHSPAWSEXXTPN 704
AE G AHSPAWSE TPN
Sbjct: 24 AERGVRAHSPAWSERPTPN 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,923,996
Number of Sequences: 1657284
Number of extensions: 14619855
Number of successful extensions: 41836
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 39808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41806
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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