Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C10
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123478-1|BAC85623.1|  124|Homo sapiens protein ( Homo sapiens ...    32   2.4  
BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        32   3.1  
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        32   3.1  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       32   3.1  
CR457371-1|CAG33652.1|  225|Homo sapiens PREI3 protein.                30   9.5  
BC005237-1|AAH05237.1|  225|Homo sapiens preimplantation protein...    30   9.5  
AL080070-1|CAB45697.1|  194|Homo sapiens hypothetical protein pr...    30   9.5  
AJ580638-1|CAE45270.1|  225|Homo sapiens Mob1 protein protein.         30   9.5  
AF250319-1|AAG44567.1|  193|Homo sapiens CGI95-iso protein.            30   9.5  
AF151853-1|AAD34090.1|  225|Homo sapiens CGI-95 protein protein.       30   9.5  
AF093825-1|AAP97221.1|  223|Homo sapiens 2C4D protein.                 30   9.5  
AC020550-2|AAX93147.1|  225|Homo sapiens unknown protein.              30   9.5  
AB015441-1|BAB19057.1|  225|Homo sapiens Mob3 protein.                 30   9.5  

>AK123478-1|BAC85623.1|  124|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41484 fis, clone BRTHA2003030. ).
          Length = 124

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +2

Query: 497 PPPWTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPXRLPDTCPP 649
           P  WT +++  A + G  + Q  K  R+ PL+AP       P  LPD  PP
Sbjct: 74  PEGWT-VSRCPANICGISSTQQGKRWRQKPLQAPEGTHFPDPVHLPDPRPP 123


>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 654 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 526
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 654 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 526
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 654 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 526
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>CR457371-1|CAG33652.1|  225|Homo sapiens PREI3 protein.
          Length = 225

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 685
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>BC005237-1|AAH05237.1|  225|Homo sapiens preimplantation protein 3
           protein.
          Length = 225

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 685
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AL080070-1|CAB45697.1|  194|Homo sapiens hypothetical protein
           protein.
          Length = 194

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 685
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AJ580638-1|CAE45270.1|  225|Homo sapiens Mob1 protein protein.
          Length = 225

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 685
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AF250319-1|AAG44567.1|  193|Homo sapiens CGI95-iso protein.
          Length = 193

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 685
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 39  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 79


>AF151853-1|AAD34090.1|  225|Homo sapiens CGI-95 protein protein.
          Length = 225

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 685
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AF093825-1|AAP97221.1|  223|Homo sapiens 2C4D protein.
          Length = 223

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 685
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 69  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 109


>AC020550-2|AAX93147.1|  225|Homo sapiens unknown protein.
          Length = 225

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 685
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AB015441-1|BAB19057.1|  225|Homo sapiens Mob3 protein.
          Length = 225

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 YKDTRRFPLEAPSCALLFRPXRLPDTCPPFSLREAWRFLIA 685
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,238,075
Number of Sequences: 237096
Number of extensions: 2358087
Number of successful extensions: 7030
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7029
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)