Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C09
         (869 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g42620.1 68418.m05188 expressed protein                             44   1e-04
At3g09000.1 68416.m01053 proline-rich family protein                   30   1.7  
At4g17350.1 68417.m02602 expressed protein                             29   3.1  
At1g69730.1 68414.m08024 protein kinase family protein contains ...    29   4.0  
At5g41390.1 68418.m05029 hypothetical protein contains 1 predict...    29   5.3  
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f...    29   5.3  
At1g28420.1 68414.m03494 homeobox transcription factor, putative...    28   7.1  
At4g26660.1 68417.m03841 expressed protein weak similarity to ph...    28   9.3  
At3g57630.2 68416.m06421 exostosin family protein contains Pfam ...    28   9.3  
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ...    28   9.3  
At2g43590.1 68415.m05417 chitinase, putative similar to basic en...    28   9.3  

>At5g42620.1 68418.m05188 expressed protein
          Length = 841

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +1

Query: 523 ICTCFPDHVKNAGGFCIATCPIGCQ-NGHCSGRECVCRDGFKLXYGRKYCVPACSNNCAG 699
           IC  + +    +    +  CP  C  NG C   +C C  G+   +G      +C NNC G
Sbjct: 584 ICPAYHELCSTSVVSVLGQCPNSCNFNGDCVDGKCRCLLGY---HGHDCRNRSCPNNCNG 640

Query: 700 VGNCTSPNRCDCAPGY 747
            G CT+   C C  G+
Sbjct: 641 HGKCTTQGVCICENGF 656


>At3g09000.1 68416.m01053 proline-rich family protein
          Length = 541

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = +2

Query: 470 ASRTAAKDASTHCARRPKSARASLTTSRTPAASASLHARLDVKMATAP-VESASAGMALN 646
           A+ T      T    RP + RAS + S TP + A+L A        AP   + S+G A +
Sbjct: 160 ATPTRRSTTPTTSTSRPVTTRASNSRSSTPTSRATLTAARATTSTAAPRTTTTSSGSARS 219

Query: 647 XT-TDVNTVCQLAVTTAPVS 703
            T T  N     A +  PVS
Sbjct: 220 ATPTRSNPRPSSASSKKPVS 239


>At4g17350.1 68417.m02602 expressed protein 
          Length = 405

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
 Frame = +2

Query: 446 GTSTTLTFASRTAAKDASTHCARRPKSAR--ASLTTSRTPAASASLHARLDVKM--ATAP 613
           G   TLT A+ TA +  +   AR+PK AR  A++T      + +  HA    ++     P
Sbjct: 220 GDLMTLTAAAATALRGEAALKARQPKEARKNAAITPFERSFSDSHWHANFQYRLEEPNLP 279

Query: 614 VESASAGMALNXTTDVNTVC 673
            E      A N       VC
Sbjct: 280 FEGELMQCARNGVQRTKRVC 299


>At1g69730.1 68414.m08024 protein kinase family protein contains
           Pfam profile: PF00069 Eukaryotic protein kinase domain
          Length = 792

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +1

Query: 622 CVCRDGFKLXYGRKYCVPACSNNCAGVGNCTSPNRC 729
           C+C D   L Y R  C      N   +G C   N C
Sbjct: 307 CICDDNAYLSYARCSCTRGFQGNPYRLGGCKDINEC 342


>At5g41390.1 68418.m05029 hypothetical protein contains 1 predicted
           transmembrane domain;
          Length = 297

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 424 SCCNGYVRNIYNPNICEPHCSKGCVNALCTAPEICTCFPDHV 549
           +CC GY+        C   C +      C A E+C CF + V
Sbjct: 63  TCCGGYMP-------CSGKCGESKCPQFCLATEVCLCFGNSV 97


>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
           factor family protein similar to to PRESSED FLOWER
           (GP:17907768) {Arabidopsis thaliana};
          Length = 268

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 229 DNTNENIAKFYGNNTSHGFLSQNHTVNTMS 318
           +N  EN+ K YG+ + H    Q+H+ N  S
Sbjct: 159 NNGMENLFKMYGHESDHNHQQQHHSSNAAS 188


>At1g28420.1 68414.m03494 homeobox transcription factor, putative
           similar to homeobox transcription factor Hox7 GI:19486
           [Lycopersicon peruvianum]
          Length = 1703

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 521 KSARASLTTSRTPAASASLHARLDVKM 601
           KS    LTTS+TP AS S+    DVK+
Sbjct: 758 KSGLRDLTTSKTPEASISVALTRDVKL 784


>At4g26660.1 68417.m03841 expressed protein weak similarity to
           phragmoplast-associated kinesin-related protein 1
           [Arabidopsis thaliana] GI:8745333
          Length = 806

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -2

Query: 193 PTSRTDRRWIPARARAHI*STLFPSCVSGSRRPLVTNADTTXP 65
           P   ++ R++ +   + I   L P  +SG ++P++ N DT  P
Sbjct: 4   PAILSENRFLGSITSSSI-RNLLPKSISGKQKPIIQNPDTKIP 45


>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 791

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +1

Query: 619 ECVCRDGFKLXYGRKYCVPA---CSNNCAGVGNCTSPNRCDCAPGYXTT 756
           EC C+  +   +GR   +P    C N C+G G C     C C  G+  T
Sbjct: 254 ECDCK--YDCLWGRFCEIPVQCTCVNQCSGHGKCRG-GFCQCDKGWFGT 299


>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 793

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +1

Query: 619 ECVCRDGFKLXYGRKYCVPA---CSNNCAGVGNCTSPNRCDCAPGYXTT 756
           EC C+  +   +GR   +P    C N C+G G C     C C  G+  T
Sbjct: 256 ECDCK--YDCLWGRFCEIPVQCTCVNQCSGHGKCRG-GFCQCDKGWFGT 301


>At2g43590.1 68415.m05417 chitinase, putative similar to basic
           endochitinase CHB4 precursor SP:Q06209 from [Brassica
           napus]
          Length = 264

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +1

Query: 526 CTCFPDHVKNAGGFC---IATCPIGCQNGHCSG 615
           C C P+   +  G+C    A C +GC++G C G
Sbjct: 27  CGCAPNLCCSQFGYCGTDDAYCGVGCRSGPCRG 59


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,827,136
Number of Sequences: 28952
Number of extensions: 379867
Number of successful extensions: 1012
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2038669600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)