Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C07
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   3.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 328  YWCSKGASPGK 360
            YW  KGA PGK
Sbjct: 2548 YWIEKGADPGK 2558


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 615 FIAIGNV*KXSALSTQFCFEEIESKVYPEVH 523
           F+ + +V    AL   +CF     KV+P  H
Sbjct: 166 FVVMTSVIMTLALGNPYCFNSSVYKVFPVEH 196


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -3

Query: 282 RCVCGLDVARXRACATRQDPGPQESXCE 199
           +CV    V R    A R  PGP    CE
Sbjct: 153 QCVLADGVERGILTANRMIPGPSIQVCE 180


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -3

Query: 282 RCVCGLDVARXRACATRQDPGPQESXCE 199
           +CV    V R    A R  PGP    CE
Sbjct: 153 QCVLADGVERGILTANRMIPGPSIQVCE 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,310
Number of Sequences: 336
Number of extensions: 2336
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)