BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP04_F_C07 (881 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9 SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31) 29 5.0 SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 5.0 SB_34725| Best HMM Match : CTP_transf_2 (HMM E-Value=8.2) 29 6.6 SB_18598| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7 >SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 683 Score = 29.9 bits (64), Expect = 2.9 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -1 Query: 383 SEHLTLQSLPGLAPLLHQYRFVELEQSGG 297 + HL ++++ LA L Q++F+E+E+ G Sbjct: 484 TNHLDMETIEALAKALRQFKFIEMEKKEG 512 >SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31) Length = 353 Score = 29.1 bits (62), Expect = 5.0 Identities = 19/71 (26%), Positives = 28/71 (39%) Frame = -3 Query: 237 TRQDPGPQESXCESPXXRSAGTRPQTRERXGGKNPTQXTTKSEKXGNGGXAXGAGXGPET 58 T++ PQE+ S +SAG+ P + P Q + E G G G E Sbjct: 199 TKEGNSPQENSKTSGQGQSAGSVPSLTSTGSERKPEQQENQQES-GKSGKQPTEGDAREQ 257 Query: 57 XGAQX*KKAPS 25 +Q K P+ Sbjct: 258 SPSQSGSKQPN 268 >SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) Length = 2123 Score = 29.1 bits (62), Expect = 5.0 Identities = 19/71 (26%), Positives = 28/71 (39%) Frame = -3 Query: 237 TRQDPGPQESXCESPXXRSAGTRPQTRERXGGKNPTQXTTKSEKXGNGGXAXGAGXGPET 58 T++ PQE+ S +SAG+ P + P Q + E G G G E Sbjct: 477 TKEGNSPQENSKTSGQGQSAGSVPSLTSTGSERKPEQQENQQES-GKSGKQPTEGDAREQ 535 Query: 57 XGAQX*KKAPS 25 +Q K P+ Sbjct: 536 SPSQSGSKQPN 546 >SB_34725| Best HMM Match : CTP_transf_2 (HMM E-Value=8.2) Length = 172 Score = 28.7 bits (61), Expect = 6.6 Identities = 16/30 (53%), Positives = 19/30 (63%) Frame = +3 Query: 219 ALGLVWSRTRAAVPRPSRTRTVTARKASGL 308 AL L W RT A+VPR R RT TA + + L Sbjct: 127 ALSLYWGRTPASVPR-LRLRTPTALRRARL 155 >SB_18598| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 439 Score = 28.3 bits (60), Expect = 8.7 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = +3 Query: 441 VTASMP--GTVGRTTARAPYLILAAAKFHCELQGRLSIRSPRNRTV 572 VT +P GTVGR+ P+ ++ A C L + +P N V Sbjct: 330 VTIFLPILGTVGRSIGTHPWYLMIPATISCSFAFMLPVATPPNAIV 375 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,842,892 Number of Sequences: 59808 Number of extensions: 328674 Number of successful extensions: 923 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 920 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2514529411 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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