Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C07
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical ...    29   4.4  
AC006772-3|AAF60608.1|   85|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical
           protein C09E7.5 protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +2

Query: 341 KAPVRAKTATLSAPTS*LNDITKAAKCAKKIY 436
           K+P +  T T+SAP+S L+D T+ A C +++Y
Sbjct: 420 KSPGKNNTVTVSAPSSELDD-TECAICLEEMY 450


>AC006772-3|AAF60608.1|   85|Caenorhabditis elegans Hypothetical
           protein Y46D2A.3 protein.
          Length = 85

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 288 PLRCVCGLDVARXRACATRQDPGPQESXC 202
           P+RC C     R   CA R  P P+ + C
Sbjct: 40  PIRCKCSGPTKRKAPCANRPCPFPRTTCC 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,093,922
Number of Sequences: 27780
Number of extensions: 232602
Number of successful extensions: 566
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)