Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_C05
(907 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 58 4e-07
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 54 5e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 51 5e-05
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 49 2e-04
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 44 0.007
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 42 0.022
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 40 0.066
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 37 0.81
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 35 3.3
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 34 5.7
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 33 7.6
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 57.6 bits (133), Expect = 4e-07
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -2
Query: 492 PLAXLWLTXSFLRYPLILWITVLPPLSEXIPLAAAERP 379
P+ LT SF YPLILWITVLPPLSE PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 54.0 bits (124), Expect = 5e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +1
Query: 289 SALMNRPTRGERRFAYWALFRFLA 360
+ALMNRPTRGERRFAYWALFRFLA
Sbjct: 25 AALMNRPTRGERRFAYWALFRFLA 48
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 50.8 bits (116), Expect = 5e-05
Identities = 39/110 (35%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +1
Query: 361 SLTRCARSFGCGERYXLTQRR*YGYPQNQGITQERXCEPKXSQRAGTRKKGALLAVFXXX 540
SLTR ARSFGCGERY LT + + P+ S+ F
Sbjct: 41 SLTRYARSFGCGERYRLTDGDGNFLEDTRKTLSKEEIRPRRSR-------------FSIG 87
Query: 541 XXXXTSXXKIDAQVRGGXTRXDYKXTXXFP---PGXSLXALSCSDPXXYR 681
TS K DAQ+ GG TR DYK FP P +L L P +R
Sbjct: 88 SAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLPVSFR 137
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = -1
Query: 730 WRRRXXFPKGRKAEQVSGXRQGRNRRAXXGXFQGGXAXYXYSPVG 596
+ + FPKG+KAEQVSG RQGRNRRA G G + SPVG
Sbjct: 50 YEKAPRFPKGKKAEQVSGKRQGRNRRAHEGA-AGEKSPASLSPVG 93
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 43.6 bits (98), Expect = 0.007
Identities = 28/53 (52%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 553 TSXXKIDAQVRGGXTRXDYKXTXXFPPGXSLXALSCS---DPXXYRIPVPPFS 702
TS KIDAQVRGG TR DYK T FP L A SC+ P PPFS
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFP----LEAPSCALLFRPCRLPDTCPPFS 72
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 41.9 bits (94), Expect = 0.022
Identities = 23/45 (51%), Positives = 26/45 (57%)
Frame = +1
Query: 580 VRGGXTRXDYKXTXXFPPGXSLXALSCSDPXXYRIPVPPFSPSGN 714
VR G TR D K L ALSCS+P RIPVPPFS +G+
Sbjct: 23 VRSGETRQDLKIITVSDESLPL-ALSCSNPAVSRIPVPPFSLAGS 66
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 40.3 bits (90), Expect = 0.066
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = +3
Query: 360 LTDXXXXXXXXXXXXXXHSKAVIRLSTESGDNAGK 464
LTD HSKAVIRLSTESGDNAGK
Sbjct: 23 LTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGK 57
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.5 bits (88), Expect = 0.12
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1
Query: 343 APNTQTASPRALADSLMQ 290
APNTQTASPRALADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 36.7 bits (81), Expect = 0.81
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +1
Query: 553 TSXXKIDAQVRGGXTRXDYKXTXXFPPGXSLXALSCS 663
TS K DAQ+ GG TR DYK T FP L A SC+
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFP----LAAPSCA 92
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 34.7 bits (76), Expect = 3.3
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 322 RRFAYWALFRF--LASLTRCARSFGCGERYXL-TQRR*YGYPQNQGITQ 459
R A W L L S TRC RS GCG + R YG PQ QG+ Q
Sbjct: 274 RSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 33.9 bits (74), Expect = 5.7
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +1
Query: 94 DPDXIRYXDEFGXTXTRM 147
DPD IRY DEFG T TRM
Sbjct: 346 DPDMIRYIDEFGQTTTRM 363
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.5 bits (73), Expect = 7.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 477 WLTXSFLRYPLILWITVLPPLSEXIPLAAAERP 379
W F LI+W+ LPPL++ IP+A+ + P
Sbjct: 169 WGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,216,455
Number of Sequences: 1657284
Number of extensions: 10533753
Number of successful extensions: 16647
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16628
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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