Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C04
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    56   4e-10
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    49   4e-08
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 56.0 bits (129), Expect = 4e-10
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
 Frame = +1

Query: 349 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAACFH 528
           L R E F        + A K+ R+   A+  D  +  A + R+R+N  +F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 529 RTDCKGLYLPAPYEIYPYFFVDSHVISXXXXXXXXXXXXDPVLWKYYGITVTDDNLVXID 708
           R D + L LP+   ++P  +VDS V +                 +     V + +   I+
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQVFARA---------------REEAHIVPEGSRTPIE 178

Query: 709 WRKGVRRS-LSXNDVMSYFMEDVDLNTYMYYLHMNYPF 819
             +    S L     ++Y+ ED+ LN + ++ H+ YPF
Sbjct: 179 IPQDFTASDLDEEHRVAYWREDIGLNLHHWHWHLVYPF 216


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
 Frame = +1

Query: 433 KDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLPAPYEIYPYFFVDSHVISX 612
           ++ D  +  A + R+R+N  +F YA + A  HR D + + LP+  E +P  +VDS V + 
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAK 161

Query: 613 XXXXXXXXXXXDPVLWKYYGITVTDDNLVXIDWRKGVRRS-LSXNDVMSYFMEDVDLNTY 789
                           +     V + +   I+  +    S L     ++YF ED+ +N +
Sbjct: 162 A---------------REEATVVPEGSRTPIEIPRDYTASDLEEEHRLAYFREDLGINLH 206

Query: 790 MYYLHMNYPFWMTDDAYGINR 852
            ++ H+ YPF    +    NR
Sbjct: 207 HWHWHLVYPFEAAREVVAKNR 227



 Score = 25.0 bits (52), Expect = 0.78
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 250 KEIAKEYNIEKSCDKYMNVDVVKQFMEMYKMGMLPRGETFV 372
           ++I   YN E+ C+K         F E  K    P+ ++ V
Sbjct: 237 QQIIARYNFERLCNKLKRATRFNDFNEAIKEAYFPKLDSLV 277



 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 660 PEDRVLGGFSHLHHKGFTDDMAVNEE 583
           P   V   F+HL H+ FT  + VN +
Sbjct: 466 PRGSVFVRFTHLQHQPFTYKITVNNQ 491


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 501 DEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 394
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 338 LYISMNCLTTSTFMYLSQLFSMLYSL 261
           L+++ NC   S   Y+S +F+ +  L
Sbjct: 117 LFVASNCFFWSYQSYMSYIFANIMGL 142


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 338 LYISMNCLTTSTFMYLSQLFSMLYSL 261
           L+++ NC   S   Y+S +F+ +  L
Sbjct: 117 LFVASNCFFWSYQSYMSYIFANIMGL 142


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 175 DMKMKELCIMKLLDHI 222
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 709 WRKGVRRSLSXND 747
           W+  +R SLS ND
Sbjct: 184 WQNSIRHSLSFND 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,475
Number of Sequences: 336
Number of extensions: 3575
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)