Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_C03
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   2.1  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   4.9  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   6.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.5  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 229 PFPTVGWAKNGSGSXITT 176
           P+P   WAKN + S IT+
Sbjct: 107 PYPNWSWAKNQNCSGITS 124


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 229 PFPTVGWAKNGSGSXITT 176
           P+P   WAKN + S IT+
Sbjct: 104 PYPDWTWAKNENCSGITS 121


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 194 RSILCPAYCRKRLRT 238
           +SI+C  +C++R  T
Sbjct: 74  KSIICKCFCKRRTNT 88


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 194 RSILCPAYCRKRLRT 238
           +SI+C  +C++R  T
Sbjct: 522 KSIICKCFCKRRTNT 536


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,563
Number of Sequences: 438
Number of extensions: 3603
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)