Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B24
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    32   0.65 
Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    29   4.5  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   4.5  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   4.5  

>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -3

Query: 569 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 465
           AF + G  F  R  R P  L   HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


>Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical
           protein K02B12.7 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +2

Query: 449 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQXEDSKRPVAEPTETXPTN 625
           + + FN +LK  NLP    +EG      + LK T P++ +K+ E S +PV    +    N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368

Query: 626 VSREE 640
           V  ++
Sbjct: 369 VEDDD 373


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 506  SEGSWVYEKDVLKITFPLKQKQXEDSKRPVAEPTETXPTNVSRE 637
            +E S   + DV KI  PL+Q Q +     VA P+E    +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 527  EKDVLKITFPLKQKQXEDSKRPVAEPTETXPTNVSRE 637
            + DV K+  PL+Q Q +     VA P+E    +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 506  SEGSWVYEKDVLKITFPLKQKQXEDSKRPVAEPTETXPTNVSRE 637
            +E S   + DV KI  PL+Q Q +     VA P+E    +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 527  EKDVLKITFPLKQKQXEDSKRPVAEPTETXPTNVSRE 637
            + DV K+  PL+Q Q +     VA P+E    +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 506  SEGSWVYEKDVLKITFPLKQKQXEDSKRPVAEPTETXPTNVSRE 637
            +E S   + DV KI  PL+Q Q +     VA P+E    +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 527  EKDVLKITFPLKQKQXEDSKRPVAEPTETXPTNVSRE 637
            + DV K+  PL+Q Q +     VA P+E    +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,648,451
Number of Sequences: 27780
Number of extensions: 280371
Number of successful extensions: 759
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)