Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_B23
(887 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 249 8e-65
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 230 3e-59
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 206 6e-52
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 179 8e-44
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 165 1e-39
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 145 1e-33
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 140 3e-32
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 140 6e-32
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 137 3e-31
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 133 7e-30
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 131 2e-29
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 107 3e-22
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 95 2e-18
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 88 3e-16
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 87 7e-16
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 77 5e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 68 4e-10
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 67 6e-10
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 63 1e-08
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 62 2e-08
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 61 3e-08
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 60 1e-07
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 60 1e-07
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 56 9e-07
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 54 6e-06
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 51 3e-05
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 51 3e-05
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 50 8e-05
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 50 1e-04
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 49 1e-04
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 46 0.001
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 45 0.003
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 44 0.005
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 43 0.009
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.028
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 41 0.037
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 39 0.15
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 37 0.60
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 5.6
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 34 5.6
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 9.7
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 33 9.7
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 249 bits (609), Expect = 8e-65
Identities = 116/155 (74%), Positives = 137/155 (88%)
Frame = +1
Query: 229 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 408
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 409 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 588
MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 589 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
I R++T+++L+ VV KL+PDSIAKDIEKAC +YP
Sbjct: 175 IKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYP 209
Score = 69.7 bits (163), Expect = 9e-11
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +3
Query: 126 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 266
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQ + ++G+ F
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV IR VKVLK PRF++S LMELH
Sbjct: 209 PLHDVYIRKVKVLKKPRFDLSSLMELH 235
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 230 bits (563), Expect = 3e-59
Identities = 114/162 (70%), Positives = 131/162 (80%)
Frame = +1
Query: 208 LSTVPXXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 387
L T TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 388 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 567
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 568 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYP
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 61.3 bits (142), Expect = 3e-08
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +3
Query: 126 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 266
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQ + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Score = 43.2 bits (97), Expect = 0.009
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV +R VK+LK P+FE+ KLMELH
Sbjct: 206 PLHDVFVRKVKMLKKPKFELGKLMELH 232
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 206 bits (503), Expect = 6e-52
Identities = 101/155 (65%), Positives = 122/155 (78%)
Frame = +1
Query: 229 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 408
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 409 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 588
+V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 589 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
+T T+ +L+E+V K IP+SI ++IEKA IYP
Sbjct: 567 MTNMATSCDLKELVKKFIPESIGREIEKATSSIYP 601
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 132 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQ 224
DPF +KDWYD+KAPS+F R VG TLV+RTQ
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQ 447
Score = 40.3 bits (90), Expect = 0.064
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL++V IR VK+LK P+F++ KLME+H
Sbjct: 601 PLQNVYIRKVKILKAPKFDLGKLMEVH 627
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 179 bits (436), Expect = 8e-44
Identities = 86/154 (55%), Positives = 114/154 (74%)
Frame = +1
Query: 232 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 411
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 412 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 591
+V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 592 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
R+ + L+++ NKLIP+ I ++IEKA GIYP
Sbjct: 173 QREASTCTLQQLTNKLIPEVIGREIEKATQGIYP 206
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 132 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 266
DPF RKDWY +KAP+ F+ R VG TLVNR+ +N ++G+ F
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIF 66
Score = 33.9 bits (74), Expect = 5.6
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL++V IR VK+LK P+F++ L+ LH
Sbjct: 206 PLQNVHIRKVKLLKQPKFDLGGLLALH 232
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 165 bits (402), Expect = 1e-39
Identities = 82/142 (57%), Positives = 110/142 (77%)
Frame = +1
Query: 229 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 408
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 409 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 588
++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 589 ITRDVTNSELREVVNKLIPDSI 654
+T V++++L+ VV+ LI S+
Sbjct: 171 LTETVSSNDLKTVVDYLIGVSL 192
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +3
Query: 129 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQXNENCFGRIEGKSF 266
VDPFTRK+WY V+AP+ F K +VG T VNRTQ + ++G+ +
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 145 bits (352), Expect = 1e-33
Identities = 74/165 (44%), Positives = 104/165 (63%), Gaps = 3/165 (1%)
Frame = +1
Query: 208 LSTVPXXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 387
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 388 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 558
+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 559 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
RAIR+K+ IT + + E LI + K IEK I+P
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFP 212
Score = 46.4 bits (105), Expect = 0.001
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 129 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSFRS 272
+DP +RK+WYD +AP FS + G TLV ++ N I+G+ S
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVES 70
Score = 33.5 bits (73), Expect = 7.4
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELHXRRR 784
PL+++ IR VKVLK P+ + +K+ EL+ +
Sbjct: 212 PLQNITIRKVKVLKRPKLDATKIAELYSHEK 242
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 140 bits (340), Expect = 3e-32
Identities = 67/155 (43%), Positives = 104/155 (67%)
Frame = +1
Query: 229 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 408
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 409 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 588
M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 589 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
+ ++V+ + +++ +S+AK+I KA I+P
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFP 205
Score = 33.5 bits (73), Expect = 7.4
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 129 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGK 260
+DP RK+W+++ AP F+ G T +N++ I+G+
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGR 62
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 140 bits (338), Expect = 6e-32
Identities = 68/131 (51%), Positives = 88/131 (67%)
Frame = +1
Query: 316 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 495
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 496 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 675
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 676 CHGIYPSARCL 708
I+P + L
Sbjct: 126 ASSIFPLSGAL 136
Score = 33.1 bits (72), Expect = 9.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL +R VKVLK P+ ++ +++ELH
Sbjct: 131 PLSGALVRKVKVLKKPKLDLGRILELH 157
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 137 bits (332), Expect = 3e-31
Identities = 71/146 (48%), Positives = 99/146 (67%)
Frame = +1
Query: 229 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 408
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 409 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 588
+VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ IRK M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 589 ITRDVTNSELREVVNKLIPDSIAKDI 666
IT++ + EL + V+ L + K +
Sbjct: 174 ITKEAASRELTQFVDYLKKTNFQKKL 199
Score = 45.6 bits (103), Expect = 0.002
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +3
Query: 126 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGK 260
I +PF++K+WY+VK P F +R VG +VN+T +++G+
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGR 66
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 133 bits (321), Expect = 7e-30
Identities = 58/155 (37%), Positives = 100/155 (64%)
Frame = +1
Query: 229 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 408
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 409 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 588
+++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+ +R ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 589 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
I R ++ +++E V+ L + ++ + + C+ I P
Sbjct: 175 IKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILP 209
Score = 43.2 bits (97), Expect = 0.009
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 132 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSFRS 272
+ RK+WYDV AP+ F KRQ T+ N+TQ + G+ F +
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEA 69
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 131 bits (317), Expect = 2e-29
Identities = 75/156 (48%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Frame = +1
Query: 229 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 408
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 409 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHTQVRAIRKKMCE 585
V KWQ ++EA+ DVKT D Y+L +FC+G+T N + R+ AQ+ QV I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 586 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
I+ D ++L+EV+NKL+PD++ KD+EKAC IYP
Sbjct: 156 IM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYP 189
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV +R VK+L+ P+ ++ KL ELH
Sbjct: 189 PLHDVFVRKVKILQKPKLDLGKLPELH 215
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 107 bits (258), Expect = 3e-22
Identities = 54/150 (36%), Positives = 88/150 (58%)
Frame = +1
Query: 256 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 435
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 436 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 615
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 616 LREVVNKLIPDSIAKDIEKACHGIYPSARC 705
+++++ KL +++ K IE+ I+P C
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNC 162
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 95.5 bits (227), Expect = 2e-18
Identities = 47/151 (31%), Positives = 84/151 (55%)
Frame = +1
Query: 241 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 420
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 421 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 600
KW TLIE ++ KT DGY L++F I + K + KT Y +Q RA+R+++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 601 VTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
N ++++ ++++ I + IE C I+P
Sbjct: 172 GINMDIKDFIHRIYSLKIYEKIEINCSKIFP 202
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/136 (33%), Positives = 74/136 (54%)
Frame = +1
Query: 232 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 411
++A++ + RV+EV+L DL + KF L + V L NFHGMD+T K
Sbjct: 53 RVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGS 112
Query: 412 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 591
+ +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +R + E +
Sbjct: 113 LFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETL 172
Query: 592 TRDVTNSELREVVNKL 639
++ + +V KL
Sbjct: 173 HNELGKVSIPVLVTKL 188
Score = 37.9 bits (84), Expect = 0.34
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 132 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRT 221
DP+ +K+WY V AP+ F R +G T V +T
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKT 49
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 86.6 bits (205), Expect = 7e-16
Identities = 48/152 (31%), Positives = 82/152 (53%)
Frame = +1
Query: 232 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 411
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 412 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 591
+++K++T+I+A++D KT DG++LR+F IGFT K + S + YA + R +R M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 592 TRDVTNSELREVVNKLIPDSIAKDIEKACHGI 687
T + + ++ + + I +I + C I
Sbjct: 169 TDACEANGVEQLCKDFVDEKIENEIVEKCKQI 200
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 77.4 bits (182), Expect = 5e-13
Identities = 47/87 (54%), Positives = 58/87 (66%)
Frame = +1
Query: 208 LSTVPXXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 387
L T TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 388 LTTDKLRWMVKKWQTLIEANIDVKTTD 468
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 70.5 bits (165), Expect = 5e-11
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +1
Query: 565 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYP
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYP 153
Score = 56.4 bits (130), Expect = 9e-07
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +3
Query: 126 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQ 224
+VDPF++KDWYDV AP+MF+ R +G TLV RTQ
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQ 53
Score = 43.2 bits (97), Expect = 0.009
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV +R VK+LK P+FE+ KLMELH
Sbjct: 153 PLHDVFVRKVKMLKKPKFELGKLMELH 179
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 67.7 bits (158), Expect = 4e-10
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +1
Query: 208 LSTVPXXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 387
L T TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 388 LTTD 399
L+ D
Sbjct: 105 LSCD 108
Score = 51.6 bits (118), Expect = 3e-05
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3
Query: 129 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 266
VD ++KDWYD+KAP+MF+ R +G TLV RTQ + ++G F
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVF 67
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 66.9 bits (156), Expect = 6e-10
Identities = 45/149 (30%), Positives = 75/149 (50%)
Frame = +1
Query: 256 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 435
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 436 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 615
I+AN+ V T DG+ +RV I T K A+ +Q+ +IR+ M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 616 LREVVNKLIPDSIAKDIEKACHGIYPSAR 702
E +N+++ +A +I K IYP R
Sbjct: 153 FTEFINEVVTGKVASEIYKNTKNIYPLRR 181
Score = 33.9 bits (74), Expect = 5.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 129 VDPFTRKDWYDVKAPSMFSKRQVGTTLVN 215
VD F K+WY V AP+ F++ +G TL +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 62.9 bits (146), Expect = 1e-08
Identities = 46/149 (30%), Positives = 71/149 (47%)
Frame = +1
Query: 256 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 435
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 436 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 615
I+ +V+T+DGY +RV + ++ S KT IRKK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 616 LREVVNKLIPDSIAKDIEKACHGIYPSAR 702
E V +I D +++ K IYP R
Sbjct: 158 FSEYVKYIISDDAPRELSKELKVIYPVRR 186
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 61.7 bits (143), Expect = 2e-08
Identities = 45/151 (29%), Positives = 77/151 (50%)
Frame = +1
Query: 250 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 429
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 430 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 609
+ I+AN+DV+T DG+V+RV FT K A+ +Q++AIR+ M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 610 SELREVVNKLIPDSIAKDIEKACHGIYPSAR 702
++ + + I ++ I + IYP R
Sbjct: 152 TDFETFMQEAILGRLSAAIYRQAKFIYPLRR 182
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 61.3 bits (142), Expect = 3e-08
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Frame = +1
Query: 244 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 423
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 424 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 603
+ I+ IDV T DGY +RV + FT T A+ +Q RAIRK+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 604 TNSELREVVNKLI----PDSIAKDIEKACHGIYP 693
+ E + + + +SI + I++A IYP
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEAGRKIYP 176
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 59.7 bits (138), Expect = 1e-07
Identities = 39/136 (28%), Positives = 69/136 (50%)
Frame = +1
Query: 259 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 438
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 439 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 618
A +VKT DG V+R+ +G T + +K+ A+RKKM E + + +
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDS 163
Query: 619 REVVNKLIPDSIAKDI 666
+ + +++ ++A D+
Sbjct: 164 GQFLKEILEGTLAADL 179
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 59.7 bits (138), Expect = 1e-07
Identities = 43/149 (28%), Positives = 70/149 (46%)
Frame = +1
Query: 256 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 435
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 436 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 615
IE +DV T DGY LRV + FT + + KT +Q RAIR M +I+ ++
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 616 LREVVNKLIPDSIAKDIEKACHGIYPSAR 702
+ + + + + +I K IYP R
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKKIYPIRR 185
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 56.4 bits (130), Expect = 9e-07
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Frame = +1
Query: 250 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 429
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 430 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 609
+ + +V T DGY LRV + FT R+ C + +Q AIRK M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 610 SELREVVNKLI----PDSIAKDIEKACHGIYP 693
S L E++ ++ S+A I+++ IYP
Sbjct: 149 STLDELIQLMVFSDHEGSLAYLIDESARKIYP 180
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 53.6 bits (123), Expect = 6e-06
Identities = 44/179 (24%), Positives = 78/179 (43%)
Frame = +1
Query: 250 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 429
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 430 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 609
+ I A ++V+T DG+ +RV + T + KT IR +M +II
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKE 157
Query: 610 SELREVVNKLIPDSIAKDIEKACHGIYPSARCLHPXGESVEXAPFRDLEVDGTSXAKAV 786
+ E V+ ++ + I C ++P R E +E + V+ + + V
Sbjct: 158 TPFAEFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIEFGKAAEAPVEEAAAEEVV 216
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 51.2 bits (117), Expect = 3e-05
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 1/169 (0%)
Frame = +1
Query: 244 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 423
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 424 WQTLIEANIDVKTTDGY-VLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 600
+ +++ I V L+V FT +A+ +QV+ +R KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 601 VTNSELREVVNKLIPDSIAKDIEKACHGIYPSARCLHPXGESVEXAPFR 747
++ V+ ++ ++K + C I+P R ESV A R
Sbjct: 152 AKEADFESFVSAMLKGELSKKMFAECKPIFPVRRIEIIKSESVSSAADR 200
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 51.2 bits (117), Expect = 3e-05
Identities = 36/149 (24%), Positives = 67/149 (44%)
Frame = +1
Query: 256 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 435
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 436 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 615
+EA I V TTD Y +++ + T K A +Q +AIR+ M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 616 LREVVNKLIPDSIAKDIEKACHGIYPSAR 702
++++ ++ ++ I IYP R
Sbjct: 151 FEQLIDSVVEGRLSSAIYGEAKDIYPLRR 179
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 50.0 bits (114), Expect = 8e-05
Identities = 40/153 (26%), Positives = 71/153 (46%)
Frame = +1
Query: 244 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 423
E +KGR+ + +L ++ D + F+ IAE V G F G ++T D LR +VK+
Sbjct: 42 ETVKGRIMQATLGEITNDYAKQHIKMSFK-IAE-VTGDAAYTEFVGHEVTRDYLRSLVKR 99
Query: 424 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 603
+ I+ ++ V T D +R+ ++S A Q A+R + +
Sbjct: 100 RSSRIDCHVQVVTKDNKKVRL---------TISCYTFARANIAQEHALRNAITAGLVAQA 150
Query: 604 TNSELREVVNKLIPDSIAKDIEKACHGIYPSAR 702
+L +VN ++ I+KD+ K +YP+ R
Sbjct: 151 QAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRR 183
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 49.6 bits (113), Expect = 1e-04
Identities = 39/149 (26%), Positives = 66/149 (44%)
Frame = +1
Query: 256 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 435
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 436 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 615
+EA+I V TTD Y +RV + T K A +Q +AIR+ M + + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 616 LREVVNKLIPDSIAKDIEKACHGIYPSAR 702
V+ ++ +++ I IYP R
Sbjct: 151 FESFVDAIVEGNLSSAIYGDAKLIYPLRR 179
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 49.2 bits (112), Expect = 1e-04
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Frame = +1
Query: 256 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 435
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 436 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNS 612
I +D+ T DG+ LRV + T Y H Q IRK M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 613 ELREVVNKLIPDSIAKDIEKACHGIYP 693
E V ++I ++A +I I P
Sbjct: 158 TFDEFVQEMIFGNLANNIFNEAKKIAP 184
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 46.4 bits (105), Expect = 0.001
Identities = 36/152 (23%), Positives = 73/152 (48%)
Frame = +1
Query: 238 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 417
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 418 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 597
++++ I+ IDV T DGY++R+ + T K Q + ++IR K +++
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK---------RVQTSVKQSIRAKTRDVLLG 158
Query: 598 DVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
V + + ++ S+ +I+ IYP
Sbjct: 159 YVAKTTYDALQVAMLDGSLETEIQNQIKTIYP 190
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 44.8 bits (101), Expect = 0.003
Identities = 35/151 (23%), Positives = 68/151 (45%)
Frame = +1
Query: 250 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 429
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 430 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 609
+ I+A+ VKT D +++ + T T A+ +Q + +R+ + +++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAE 152
Query: 610 SELREVVNKLIPDSIAKDIEKACHGIYPSAR 702
E++ ++ +A ++ IYP R
Sbjct: 153 KSFDELIKLVVNGKLASEVYHNAKKIYPLKR 183
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/93 (26%), Positives = 49/93 (52%)
Frame = +1
Query: 253 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 432
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 433 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 531
+ +DVKT+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 43.2 bits (97), Expect = 0.009
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV +R VK+LK P+FE+ KLMELH
Sbjct: 21 PLHDVFVRKVKMLKKPKFELGKLMELH 47
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 631 NKLIPDSIAKDIEKACHGIYP 693
NKLIPDSI KDIEKAC IYP
Sbjct: 1 NKLIPDSIGKDIEKACQSIYP 21
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.028
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 126 IVDPFTRKDWYDVKAPSMFSKRQVGTT 206
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
Score = 40.3 bits (90), Expect = 0.064
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +2
Query: 647 TPLPRTSRRPAMASTPLRDVCIRXVKVLKXPRFEISKLMELH 772
TP P + P + R +C++ VK+LK P+FE+ KLMELH
Sbjct: 47 TPSPGP-KEPKLHLMVSRVMCLKKVKMLKKPKFELGKLMELH 87
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 41.1 bits (92), Expect = 0.037
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 259 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 435
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 436 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 615
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 616 LREVVNKLIPDSIAKDIEKACHGIYP 693
+ + D I I++ + P
Sbjct: 178 IDFIYKICCSDVIGNSIKRRSKRVIP 203
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 39.1 bits (87), Expect = 0.15
Identities = 38/151 (25%), Positives = 63/151 (41%)
Frame = +1
Query: 241 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 420
S + RV EV +++L + FR+ +G F G + D +R +V+
Sbjct: 41 SNSMVNRVVEVPISELTGNFKKSNEKALFRITN--CEGTKCKTIFIGHYIGDDYIRRLVR 98
Query: 421 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 600
+ + I+ DVKT+D ++ V + T+ + +K IRK + + I
Sbjct: 99 RRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF---------QIRKVLTDFILNK 149
Query: 601 VTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
+ E V LI D I D+ A IYP
Sbjct: 150 GLSLPYSEFVRYLIGDDIYNDMISATKDIYP 180
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 37.1 bits (82), Expect = 0.60
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = -1
Query: 218 TVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFIFPDRHVQTQT*ESR 39
+ +K A++ AE RR L+++P+ S+ V LLL++ F L +FPD H + + R
Sbjct: 104 SANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF-PLGNPLVFPDDHCELARSKVR 162
Query: 38 I 36
I
Sbjct: 163 I 163
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 5.6
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -1
Query: 452 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 288
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 33.9 bits (74), Expect = 5.6
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = -1
Query: 449 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 270
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 269 SKTLPFNPSEAIFVXLG-TVDKRGADLPLAE-HRRSLDIVPIF 147
++ + E + G T+D+ A + L H+ + D + +F
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNLPRLHQYNDDKITLF 202
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.5 bits (73), Expect = 7.4
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +1
Query: 349 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 528
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 529 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 666
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 603 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 496
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 33.1 bits (72), Expect = 9.7
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = -1
Query: 500 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 327
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 326 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVXLG 219
L + + SV + S R S L F P EA+++ +G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,116,984
Number of Sequences: 1657284
Number of extensions: 16092571
Number of successful extensions: 44476
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 42349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44365
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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