Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_B23
(887 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 238 8e-63
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 238 8e-63
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 229 4e-60
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 222 4e-58
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 204 1e-52
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 155 6e-38
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 238 bits (582), Expect = 8e-63
Identities = 114/154 (74%), Positives = 130/154 (84%)
Frame = +1
Query: 232 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 411
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 412 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 591
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 592 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
T +V+ ++L+++VNKL DSIAKDIEK+C IYP
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYP 209
Score = 66.9 bits (156), Expect = 3e-11
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +3
Query: 126 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 266
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQ ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV IR VKVLK PRF++SKL+ELH
Sbjct: 209 PLHDVYIRKVKVLKKPRFDVSKLLELH 235
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 238 bits (582), Expect = 8e-63
Identities = 114/154 (74%), Positives = 130/154 (84%)
Frame = +1
Query: 232 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 411
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 412 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 591
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 592 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
T +V+ ++L+++VNKL DSIAKDIEK+C IYP
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYP 209
Score = 66.9 bits (156), Expect = 3e-11
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +3
Query: 126 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 266
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQ ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV IR VKVLK PRF++SKL+ELH
Sbjct: 209 PLHDVYIRKVKVLKKPRFDVSKLLELH 235
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 229 bits (560), Expect = 4e-60
Identities = 109/146 (74%), Positives = 123/146 (84%)
Frame = +1
Query: 256 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 435
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 436 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 615
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGAD 133
Query: 616 LREVVNKLIPDSIAKDIEKACHGIYP 693
L+++VNKL DSIAKDIEK+C IYP
Sbjct: 134 LKQLVNKLALDSIAKDIEKSCQRIYP 159
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV IR VKVLK PRF++SKL+ELH
Sbjct: 159 PLHDVYIRKVKVLKKPRFDVSKLLELH 185
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 222 bits (543), Expect = 4e-58
Identities = 110/156 (70%), Positives = 126/156 (80%), Gaps = 2/156 (1%)
Frame = +1
Query: 232 KIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 408
+IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYR 115
Query: 409 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCE 585
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +
Sbjct: 116 SMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTD 175
Query: 586 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYP
Sbjct: 176 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYP 211
Score = 66.1 bits (154), Expect = 6e-11
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = +3
Query: 126 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 266
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQ +G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVF 67
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV IR VKVLK PRF++SKL+ELH
Sbjct: 211 PLHDVYIRKVKVLKKPRFDVSKLLELH 237
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 204 bits (499), Expect = 1e-52
Identities = 97/133 (72%), Positives = 113/133 (84%)
Frame = +1
Query: 232 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 411
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 412 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 591
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 592 TRDVTNSELREVV 630
T +V+ ++L++++
Sbjct: 176 TNEVSGADLKQLL 188
Score = 66.9 bits (156), Expect = 3e-11
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +3
Query: 126 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 266
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQ ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 155 bits (377), Expect = 6e-38
Identities = 72/104 (69%), Positives = 86/104 (82%)
Frame = +1
Query: 382 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 561
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 562 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYP 693
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYP
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYP 104
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 692 PLRDVCIRXVKVLKXPRFEISKLMELH 772
PL DV IR VKVLK PRF++SKL+ELH
Sbjct: 104 PLHDVYIRKVKVLKKPRFDVSKLLELH 130
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,728,075
Number of Sequences: 53049
Number of extensions: 769582
Number of successful extensions: 2324
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2322
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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