Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B22
         (888 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80746-1|AAB91444.1|  358|Homo sapiens CAGH4 protein.                  32   3.2  
BC104758-1|AAI04759.1|  465|Homo sapiens trinucleotide repeat co...    32   3.2  
BC068008-1|AAH68008.1|  407|Homo sapiens TNRC4 protein protein.        32   3.2  
AL589765-5|CAI17168.1|  465|Homo sapiens trinucleotide repeat co...    32   3.2  
AL589765-3|CAI17166.1|  465|Homo sapiens trinucleotide repeat co...    32   3.2  
AB209264-1|BAD92501.1|  441|Homo sapiens trinucleotide repeat co...    32   3.2  
AY165003-1|AAN73884.1|  465|Homo sapiens CUG-BP and ETR-3 like f...    30   9.8  
AF329264-1|AAK07474.1|  462|Homo sapiens CUG-BP and ETR-3 like f...    30   9.8  

>U80746-1|AAB91444.1|  358|Homo sapiens CAGH4 protein.
          Length = 358

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = +1

Query: 136 ANAQEPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 303
           A A  PV  +  A   NGY P+  +P     P    PNG    P  + A  VDP Q
Sbjct: 157 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 212


>BC104758-1|AAI04759.1|  465|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 465

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = +1

Query: 136 ANAQEPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 303
           A A  PV  +  A   NGY P+  +P     P    PNG    P  + A  VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319


>BC068008-1|AAH68008.1|  407|Homo sapiens TNRC4 protein protein.
          Length = 407

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = +1

Query: 136 ANAQEPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 303
           A A  PV  +  A   NGY P+  +P     P    PNG    P  + A  VDP Q
Sbjct: 206 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 261


>AL589765-5|CAI17168.1|  465|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 465

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = +1

Query: 136 ANAQEPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 303
           A A  PV  +  A   NGY P+  +P     P    PNG    P  + A  VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319


>AL589765-3|CAI17166.1|  465|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 465

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = +1

Query: 136 ANAQEPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 303
           A A  PV  +  A   NGY P+  +P     P    PNG    P  + A  VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319


>AB209264-1|BAD92501.1|  441|Homo sapiens trinucleotide repeat
           containing 4 variant protein.
          Length = 441

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = +1

Query: 136 ANAQEPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 303
           A A  PV  +  A   NGY P+  +P     P    PNG    P  + A  VDP Q
Sbjct: 240 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 295


>AY165003-1|AAN73884.1|  465|Homo sapiens CUG-BP and ETR-3 like
           factor 3 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 19/56 (33%), Positives = 23/56 (41%)
 Frame = +1

Query: 136 ANAQEPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 303
           A A  PV  +  A   NGY P+  +P     P    PNG    P  +    VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVDPLQ 319


>AF329264-1|AAK07474.1|  462|Homo sapiens CUG-BP and ETR-3 like
           factor 3 protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 19/56 (33%), Positives = 23/56 (41%)
 Frame = +1

Query: 136 ANAQEPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 303
           A A  PV  +  A   NGY P+  +P     P    PNG    P  +    VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVDPLQ 319


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,957,516
Number of Sequences: 237096
Number of extensions: 1402066
Number of successful extensions: 6468
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6467
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)