Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_B22
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.27
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 33 0.27
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 33 0.27
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 32 0.63
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 0.83
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 30 1.9
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical ... 30 2.5
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ... 29 5.9
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 160 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 300
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 160 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 300
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 160 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 300
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +2
Query: 170 TLTQETATNLLTTARTSLILPKT---TTLMETATNLSTTVHITWTLPKG 307
T T A N+ TT T+ I P T TT++ T T ++TT +P G
Sbjct: 30 TTTTSPAPNITTTTTTTTIAPPTNTTTTILTTTTTVTTTTTSPPLIPDG 78
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 122 LCWLWPTLKNPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 295
LC+LW L T T T T+ + T T++++ TTT +TTV + T
Sbjct: 179 LCYLWVPLTTTTT--TTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGT 234
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 137 PTLKNPLR*WKTLTQETA--TNLLTTARTSLILPKTTTLMETATNLSTTV 280
PT L T T+ TA T + T ART+ P TTT + + T L TT+
Sbjct: 368 PTTSLALETTTTATRTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTL 417
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 176 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 301
T T T TT+ T+ P TTT T STT T T P
Sbjct: 61 TTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 170 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKGRP 313
T T T+T TT T TTT T T +T T T+P P
Sbjct: 86 TPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNP 133
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 170 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKGRPYFKPTPFP 337
T T T TT T+ TTT T STT T T P T P
Sbjct: 74 TTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 164 WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKGRP 313
WK T TT + + PK TTL +T T +T+ T T +P
Sbjct: 134 WKKFTTTEEPLETTTTKRIITTPKRTTLRKTTTTTTTSTTSTSTTTTEKP 183
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 167 KTLTQETATNLLTTARTSLILPKTTT 244
KT Q T T + TT RTS +P TTT
Sbjct: 288 KTNPQITTTTMTTTTRTSTAIPTTTT 313
>AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical
protein R52.6 protein.
Length = 151
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 170 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKG 307
TL E T ++TT TS + K M AT + WTL G
Sbjct: 47 TLPYEETTEMMTTMETSTMTEKVCPEMPAATACMDLTTLGWTLELG 92
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 185 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKGRPYFKPTP 331
T T TT T+ P TTT T T T P+G F TP
Sbjct: 66 TPTTTTTTTTTTTTTPTTTTTTTTTTTPEPTTTKVKVCPQGYTSFLRTP 114
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 176 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT---LPKGRPYFKPT 328
T T T T++ PK TT + T T +TTV T T P+G F+PT
Sbjct: 170 TTTTVRKTTQTTATTMTTPKPTTTVSTTT--TTTVPPTTTPKACPQGFVLFEPT 221
>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
protein R06B10.1 protein.
Length = 1236
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +1
Query: 175 DSGNGYEPIDNRPYIVNPPKDYNPNGNGY--EPIDNGAYY---VDPPQ 303
D+ N Y+P++ +VNP K + NG+ + + + A Y VDPP+
Sbjct: 824 DNANAYKPMNPIEMVVNPTKYAKKSSNGFMEKVVKDIAEYPKPVDPPK 871
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,367,945
Number of Sequences: 27780
Number of extensions: 201842
Number of successful extensions: 680
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -