Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B22
         (888 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g23090.1 68417.m03328 hypothetical protein                          29   5.4  
At1g72110.1 68414.m08335 expressed protein                             28   7.2  
At1g22900.1 68414.m02860 disease resistance-responsive family pr...    28   7.2  
At5g44780.1 68418.m05488 expressed protein low similarity to SP|...    28   9.5  
At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik...    28   9.5  

>At4g23090.1 68417.m03328 hypothetical protein 
          Length = 179

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -1

Query: 357 YFPPRAPGKGVGLK*GRPLGRVHVICTVVDRFVAVSIRVVVFGRINDVRAVVNRFVAV 184
           +F P     GV +   RP G +HV  + V   VA++ ++  FG   DV  ++  F  +
Sbjct: 119 WFQPMLTDVGVAVHSSRPNGILHVSLSGVSPSVAIAYQLFAFG---DVEVLLTLFTII 173


>At1g72110.1 68414.m08335 expressed protein
          Length = 479

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 425 NSYEILKYIVNTLFRY*-FSKIFFTSHREHQGK 330
           N+  I++ I NTL  +  FS I  T H EH+GK
Sbjct: 41  NASTIVEGIKNTLINHPRFSSILVTGHGEHKGK 73


>At1g22900.1 68414.m02860 disease resistance-responsive family
           protein similar to pathogenesis-related protein [Pisum
           sativum] gi|4585273|gb|AAD25355
          Length = 187

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 269 STTVHITWTLPKGRPYFKPTPFPGARGGK 355
           ST + +T T+ + +PY K TPF G +  K
Sbjct: 15  STVLLLTITVTQSKPYSKTTPFQGNKPDK 43


>At5g44780.1 68418.m05488 expressed protein low similarity to
           SP|Q38732 DAG protein, chloroplast precursor
           {Antirrhinum majus}
          Length = 723

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +1

Query: 235 DYNP-NGNGYEPIDNGAYYVDPPQG 306
           +Y+P NG  Y P   G +Y  PPQG
Sbjct: 530 NYSPQNGGHYGPAQFGQWYPGPPQG 554


>At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like
           protein, putative similar to cold-regulated gene SRC2
           [Glycine max] GI:2055230; contains Pfam profile PF00168:
           C2 domain; identical to cDNA  src2-like protein
           GI:3426059
          Length = 324

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +1

Query: 226 PPKDYNPNGN--GYEPIDNGAYYVDPPQGP 309
           PP  Y   G   GY P   G Y   PPQGP
Sbjct: 217 PPGAYPQQGGYPGYPPQQQGGYPGYPPQGP 246


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,822,034
Number of Sequences: 28952
Number of extensions: 190156
Number of successful extensions: 455
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)