Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B21
         (941 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK093583-1|BAC04201.1|  329|Homo sapiens protein ( Homo sapiens ...    32   3.5  
AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein pr...    31   6.1  

>AK093583-1|BAC04201.1|  329|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36264 fis, clone THYMU2002815, weakly similar to
           AXONIN-1 PRECURSOR. ).
          Length = 329

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 385 IHXSLFFLKXFRXAPYERAIRLGPRLWI*IPFAKRXRSPNLSSNFXLKEVSHXGLQG 215
           +H ++  L  F   P +R++RLG RLW+    A+   +P +      + V+  GL G
Sbjct: 252 VHLTILVLPVFTTLPGDRSLRLGDRLWLRCA-ARGSPTPRIGWTVNDRPVTGLGLLG 307


>AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein
            protein.
          Length = 1340

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 385  IHXSLFFLKXFRXAPYERAIRLGPRLWI 302
            +H ++  L  F   P +R++RLG RLW+
Sbjct: 1018 VHLTILVLPVFTTLPGDRSLRLGDRLWL 1045


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,832,310
Number of Sequences: 237096
Number of extensions: 1300235
Number of successful extensions: 1576
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12381054106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)